RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 RAET1LQ5VY80 246 aa6□□□□□ -1.45
VPS41-204ENST00000413141 SLC6A19Q695T7 634 aa6□□□□□ -1.45
VPS41-204ENST00000413141 ARHGAP11AQ6P4F7 1023 aa6□□□□□ -1.45
VPS41-204ENST00000413141 TMEM154Q6P9G4 183 aa6□□□□□ -1.45
VPS41-204ENST00000413141 IGFL2Q6UWQ7 119 aa6□□□□□ -1.45
VPS41-204ENST00000413141 PTCHD4Q6ZW05 846 aa6□□□□□ -1.45
VPS41-204ENST00000413141 MAMDC2Q7Z304 686 aaPredicted RBP6□□□□□ -1.45
VPS41-204ENST00000413141 IGFN1Q86VF2 1251 aa6□□□□□ -1.45
VPS41-204ENST00000413141 SULF2Q8IWU5 870 aa6□□□□□ -1.45
VPS41-204ENST00000413141 LNX2Q8N448 690 aa6□□□□□ -1.45
VPS41-204ENST00000413141 TCEANCQ8N8B7 351 aa6□□□□□ -1.45
VPS41-204ENST00000413141 BPIFB6Q8NFQ5 453 aa6□□□□□ -1.45
VPS41-204ENST00000413141 TSPAN14Q8NG11 270 aa6□□□□□ -1.45
VPS41-204ENST00000413141 OR2M7Q8NG81 312 aa6□□□□□ -1.45
VPS41-204ENST00000413141 OR8J1Q8NGP2 316 aa6□□□□□ -1.45
VPS41-204ENST00000413141 OR5M1Q8NGP8 315 aa6□□□□□ -1.45
VPS41-204ENST00000413141 MOSPD2Q8NHP6 518 aa6□□□□□ -1.45
VPS41-204ENST00000413141 TMEM163Q8TC26 289 aa6□□□□□ -1.45
VPS41-204ENST00000413141 SLC25A43Q8WUT9 341 aaPredicted RBP6□□□□□ -1.45
VPS41-204ENST00000413141 TRUB1Q8WWH5 349 aaKnown RBP6□□□□□ -1.45
VPS41-204ENST00000413141 HAS2Q92819 552 aa6□□□□□ -1.45
VPS41-204ENST00000413141 DNAJA3Q96EY1 480 aa6□□□□□ -1.45
VPS41-204ENST00000413141 SCMH1Q96GD3 660 aa6□□□□□ -1.45
VPS41-204ENST00000413141 ARL5BQ96KC2 179 aa6□□□□□ -1.45
VPS41-204ENST00000413141 C5orf34Q96MH7 638 aa6□□□□□ -1.45
VPS41-204ENST00000413141 TNFRSF13CQ96RJ3 184 aa6□□□□□ -1.45
VPS41-204ENST00000413141 IL4I1Q96RQ9 567 aa6□□□□□ -1.45
VPS41-204ENST00000413141 UBL7Q96S82 380 aaPredicted RBP6□□□□□ -1.45
VPS41-204ENST00000413141 RHNO1Q9BSD3 238 aa6□□□□□ -1.45
VPS41-204ENST00000413141 IFT27Q9BW83 186 aa6□□□□□ -1.45
VPS41-204ENST00000413141 TEX12Q9BXU0 123 aa6□□□□□ -1.45
VPS41-204ENST00000413141 MRPS26Q9BYN8 205 aaKnown RBP6□□□□□ -1.45
VPS41-204ENST00000413141 OR2B2Q9GZK3 357 aa6□□□□□ -1.45
VPS41-204ENST00000413141 ENKD1Q9H0I2 346 aa6□□□□□ -1.45
VPS41-204ENST00000413141 TMEM185BQ9H7F4 350 aa6□□□□□ -1.45
VPS41-204ENST00000413141 ZNF703Q9H7S9 590 aaPredicted RBP6□□□□□ -1.45
VPS41-204ENST00000413141 ZFP64Q9NPA5 681 aa6□□□□□ -1.45
VPS41-204ENST00000413141 SERINC1Q9NRX5 453 aa6□□□□□ -1.45
VPS41-204ENST00000413141 PAK1IP1Q9NWT1 392 aaPredicted RBP6□□□□□ -1.45
VPS41-204ENST00000413141 DKK4Q9UBT3 224 aa6□□□□□ -1.45
VPS41-204ENST00000413141 SEC14L4Q9UDX3 406 aa6□□□□□ -1.45
VPS41-204ENST00000413141 BOKQ9UMX3 212 aaPredicted RBP6□□□□□ -1.45
VPS41-204ENST00000413141 BAIAP2Q9UQB8 552 aa6□□□□□ -1.45
VPS41-204ENST00000413141 RPH3AQ9Y2J0 694 aaPredicted RBP6□□□□□ -1.45
VPS41-204ENST00000413141 KLF13Q9Y2Y9 288 aaPredicted RBP6□□□□□ -1.45
VPS41-204ENST00000413141 CELSR3Q9NYQ7 3312 aa6□□□□□ -1.45
VPS41-204ENST00000413141 OR2M5A3KFT3 312 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 SH3D21A4FU49 640 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 LIPT2A6NK58 231 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 TRIM64CA6NLI5 447 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 KDM4EB2RXH2 506 aaPredicted RBP5.99□□□□□ -1.45
VPS41-204ENST00000413141 M0R082 166 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 TLX2O43763 284 aaPredicted RBP5.99□□□□□ -1.45
VPS41-204ENST00000413141 ZIC3O60481 467 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 FAM20BO75063 409 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 ENTPD6O75354 484 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 GLSO94925 669 aaPredicted RBP5.99□□□□□ -1.45
VPS41-204ENST00000413141 SLC2A10O95528 541 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 HMGN1P05114 100 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 SP1P08047 785 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 HTR1AP08908 422 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 TFPIP10646 304 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 IMPDH2P12268 514 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 CD46P15529 392 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 FKBP2P26885 142 aaKnown RBP5.99□□□□□ -1.45
VPS41-204ENST00000413141 GDF1P27539 372 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 GTF2E2P29084 291 aaKnown RBP5.99□□□□□ -1.45
VPS41-204ENST00000413141 SHC1P29353 583 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 GRPRP30550 384 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 RPL4P36578 427 aaKnown RBP5.99□□□□□ -1.45
VPS41-204ENST00000413141 AQP2P41181 271 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 MEOX1P50221 254 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 TNFSF10P50591 281 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 NUDT6P53370 316 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 CDH15P55291 814 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 B3GALT5-AS1P59052 145 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 SLC35A2P78381 396 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 FOXK2Q01167 660 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 RPL18Q07020 188 aaKnown RBP5.99□□□□□ -1.45
VPS41-204ENST00000413141 C19orf57Q0VDD7 668 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 MYBPHQ13203 477 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 MFSD13AQ14CX5 517 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 OR7A5Q15622 319 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 SGCBQ16585 318 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 OCLNQ16625 522 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 GLYR1Q49A26 553 aaPredicted RBP5.99□□□□□ -1.45
VPS41-204ENST00000413141 ALG10Q5BKT4 473 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 SLC25A30Q5SVS4 291 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 SLC25A25Q6KCM7 469 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 ZNF773Q6PK81 442 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 DPY19L2P2Q6ZN68 376 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 CCDC81Q6ZN84 652 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 GALNTL5Q7Z4T8 443 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 BCDIN3DQ7Z5W3 292 aaKnown RBP5.99□□□□□ -1.45
VPS41-204ENST00000413141 SPACA3Q8IXA5 215 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 FAM26EQ8N5C1 309 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 SCAIQ8N9R8 606 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 LRRC75AQ8NAA5 344 aa5.99□□□□□ -1.45
VPS41-204ENST00000413141 FAM83FQ8NEG4 500 aaPredicted RBP5.99□□□□□ -1.45
VPS41-204ENST00000413141 ATP6V1C2Q8NEY4 427 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms