RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 B2MP61769 119 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 SLC8B1Q6J4K2 584 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 RASGRP3Q8IV61 690 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 SLC2A12Q8TD20 617 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 C3orf49Q96BT1 292 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 CDC6Q99741 560 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 APMAPQ9HDC9 416 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 NTMQ9P121 344 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 LRRC37AA6NMS7 1700 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 MYADML2A6NDP7 307 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 OR5H14A6NHG9 310 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 GRXCR1A8MXD5 290 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 SEC14L5O43304 696 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 NDUFB6O95139 128 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 EPHA4P54764 986 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 PLEKHN1Q494U1 663 aaPredicted RBP12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 ZNF626Q68DY1 528 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 LPCAT3Q6P1A2 487 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 KLHL24Q6TFL4 600 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 SSX9Q7RTT3 188 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 ZNF101Q8IZC7 436 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 ARL14Q8N4G2 192 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 SNIP1Q8TAD8 396 aaKnown RBP12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 HCAR1Q9BXC0 346 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 RSPH9Q9H1X1 276 aaPredicted RBP12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 POFUT1Q9H488 388 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 GALTP07902 379 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 B4GALNT1Q00973 533 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 RNF212Q495C1 297 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 ACOT7LQ6ZUV0 252 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 NAA40Q86UY6 237 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 TOE1Q96GM8 510 aaKnown RBP12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 EXOGQ9Y2C4 368 aaKnown RBP12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 NUDT19A8MXV4 375 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 MED6O75586 246 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 CHRM4P08173 479 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 CALCBP10092 127 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 SELPP16109 830 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 GPR143P51810 404 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 MEF2DQ14814 521 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 ITPRIPL2Q3MIP1 535 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 ZNF770Q6IQ21 691 aaPredicted RBP12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 TMEM91Q6ZNR0 172 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 ZNF550Q7Z398 422 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 ACBD4Q8NC06 268 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 OR10H5Q8NGA6 315 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 HAVCR2Q8TDQ0 301 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 DOK4Q8TEW6 326 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 SLC6A18Q96N87 628 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 C19orf43Q9BQ61 176 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 SLC25A21Q9BQT8 299 aaPredicted RBP12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 BCL2L10Q9HD36 194 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 GFOD1Q9NXC2 390 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 PURGQ9UJV8 347 aaKnown RBP12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 ADAM29Q9UKF5 820 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 COLEC10Q9Y6Z7 277 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 ZNF823P16415 610 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 CXCL2P19875 107 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 GUCA1AP43080 201 aaPredicted RBP12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 P2RX1P51575 399 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 RGS7BPQ6MZT1 257 aaPredicted RBP12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 NRSN1Q8IZ57 195 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 PNPLA2Q96AD5 504 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 SMIM19Q96E16 107 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 TMEM231Q9H6L2 316 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 ICKQ9UPZ9 632 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 BORCS7-ASMTA0A0B4J1R7 106 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 RFPL4AA6NLU0 287 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 RFPL4AL1F8VTS6 287 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 ENPP1P22413 925 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 PPT1P50897 306 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 SSX2Q16385 188 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 EIF2S3LQ2VIR3 472 aaKnown RBP12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 Q499Y3 187 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 AADACL4Q5VUY2 407 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 FBXO42Q6P3S6 717 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 CD163Q86VB7 1156 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 ACOT4Q8N9L9 421 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 ASB13Q8WXK3 278 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 RBM18Q96H35 190 aaKnown RBP12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 SSX3Q99909 188 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 ZNF700Q9H0M5 742 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 CMC2Q9NRP2 79 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 PCDHGA9Q9Y5G4 932 aaKnown RBP12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 UBR3Q6ZT12 1888 aa12.87□□□□□ -0.35
CLTCL1-201ENST00000412649 PLPP2O43688 288 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 RBM39Q14498 530 aaKnown RBP12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 OR10K2Q6IF99 312 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 STPG2Q8N412 459 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 SENP5Q96HI0 755 aaPredicted RBP12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 PBDC1Q9BVG4 233 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 SEMA4CQ9C0C4 833 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 MRPS18AQ9NVS2 196 aaKnown RBP12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 NTNG1Q9Y2I2 539 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 LEFTY2O00292 366 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 CLEC3AO75596 197 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 RGS19P49795 217 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 ACSM1Q08AH1 577 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 CDK5R1Q15078 307 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms