RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 TRAV26-1A0A087WT03 109 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 UBA6A0AVT1 1052 aaPredicted RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 VSTM2BA6NLU5 285 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 A8MT66 165 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 MANBAO00462 879 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 MFSD11O43934 449 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 ITGBL1O95965 494 aaPredicted RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 LAMP1P11279 417 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 PTPRAP18433 802 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 FPR1P21462 350 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 CPT2P23786 658 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 MPGP29372 298 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 GZMMP51124 257 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 PSG6Q00889 435 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 RBBP4Q09028 425 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 KIAA0141Q14154 515 aaPredicted RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 GUK1Q16774 197 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 GSG1Q2KHT4 349 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 UNC50Q53HI1 259 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 RABL3Q5HYI8 236 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 ZNF529Q6P280 563 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 BRICD5Q6PL45 260 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 MRPL21Q7Z2W9 205 aaKnown RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 NUFIP2Q7Z417 695 aaKnown RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 OR56B1Q8NGI3 324 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 OR5L2Q8NGL0 311 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 OR4A15Q8NGL6 344 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 JOSD2Q8TAC2 188 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 DCAF4Q8WV16 495 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 PIH1D2Q8WWB5 315 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 KCNE4Q8WWG9 221 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 DTD2Q96FN9 168 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 CDKN2AIPNLQ96HQ2 116 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 SLC22A12Q96S37 553 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 SEPHS2Q99611 448 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 HINT2Q9BX68 163 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 RAB33BQ9H082 229 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 DEFB129Q9H1M3 183 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 CREBZFQ9NS37 354 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 AURKAIP1Q9NWT8 199 aaPredicted RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 PLEK2Q9NYT0 353 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 LRFN1Q9P244 771 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 HACL1Q9UJ83 578 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 YARS2Q9Y2Z4 477 aaKnown RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 RBM7Q9Y580 266 aaKnown RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 PDCD11Q14690 1871 aaKnown RBP4.82□□□□□ -1.64
HERC4-205ENST00000412272 TMEM269A0A1B0GVZ9 245 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 ZNF749O43361 778 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 KLF4O43474 513 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 TOMM40O96008 361 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 C1RP00736 705 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 CALCAP01258 141 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 ACRP10323 421 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 TDGF1P13385 188 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 COL5A3P25940 1745 aaPredicted RBP4.82□□□□□ -1.64
HERC4-205ENST00000412272 NDUFA6P56556 154 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 UBE2V1Q13404 147 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 SNTB2Q13425 540 aaKnown RBP4.82□□□□□ -1.64
HERC4-205ENST00000412272 SURF1Q15526 300 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 EML3Q32P44 896 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 PAGE3Q5JUK9 113 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 TMEM201Q5SNT2 666 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 ZNF678Q5SXM1 525 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 CXorf57Q6NSI4 855 aaKnown RBP4.82□□□□□ -1.64
HERC4-205ENST00000412272 FAM129CQ86XR2 697 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 ARHGAP12Q8IWW6 846 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 RNF149Q8NC42 400 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 OR1S2Q8NGQ3 325 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 ORAOV1Q8WV07 137 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 TSEN15Q8WW01 171 aaKnown RBP4.82□□□□□ -1.64
HERC4-205ENST00000412272 ASB13Q8WXK3 278 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 SCLYQ96I15 445 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 PPP1R16AQ96I34 528 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 PHB2Q99623 299 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 EPYCQ99645 322 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 PBX4Q9BYU1 374 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 SRA1Q9HD15 236 aaKnown RBP4.82□□□□□ -1.64
HERC4-205ENST00000412272 KLHL28Q9NXS3 571 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 IL17CQ9P0M4 197 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 FZD4Q9ULV1 537 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 NEU3Q9UQ49 428 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 POMT1Q9Y6A1 747 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 ANKRD20A5PA0PJZ0 165 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 HMSDA8MTL9 139 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 HRKO00198 91 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 GKN3PP0CG01 181 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 KCNE1P15382 129 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 VIPR1P32241 457 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 GLP1RP43220 463 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 OSTNP61366 133 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 SEC61A1P61619 476 aaKnown RBP4.82□□□□□ -1.64
HERC4-205ENST00000412272 HSF1Q00613 529 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 RBPJQ06330 500 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 AMHR2Q16671 573 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 C2orf76Q3KRA6 126 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 TMEM144Q7Z5S9 345 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 TSPAN33Q86UF1 283 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 TRAPPC5Q8IUR0 188 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 C1orf127Q8N9H9 656 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 BOLLQ8N9W6 283 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms