RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 GMNNO75496 209 aa17.66■□□□□ 0.42
PDLIM2-207ENST00000409417 ZNF682O95780 498 aa17.66■□□□□ 0.42
PDLIM2-207ENST00000409417 SERPINA1P01009 418 aa17.66■□□□□ 0.42
PDLIM2-207ENST00000409417 PCYT1AP49585 367 aa17.66■□□□□ 0.42
PDLIM2-207ENST00000409417 SLC16A1P53985 500 aa17.66■□□□□ 0.42
PDLIM2-207ENST00000409417 GLYATQ6IB77 296 aa17.66■□□□□ 0.42
PDLIM2-207ENST00000409417 LINC00114Q6XXX2 140 aa17.66■□□□□ 0.42
PDLIM2-207ENST00000409417 VTCN1Q7Z7D3 282 aa17.66■□□□□ 0.42
PDLIM2-207ENST00000409417 ZNF610Q8N9Z0 462 aa17.66■□□□□ 0.42
PDLIM2-207ENST00000409417 FAM156AQ8NDB6 213 aa17.66■□□□□ 0.42
PDLIM2-207ENST00000409417 TMEM43Q9BTV4 400 aa17.66■□□□□ 0.42
PDLIM2-207ENST00000409417 POLR2J2Q9GZM3 115 aaKnown RBP17.66■□□□□ 0.42
PDLIM2-207ENST00000409417 POLR2J3Q9H1A7 115 aaKnown RBP17.66■□□□□ 0.42
PDLIM2-207ENST00000409417 SLC24A3Q9HC58 644 aa17.66■□□□□ 0.42
PDLIM2-207ENST00000409417 EMC3Q9P0I2 261 aa17.66■□□□□ 0.42
PDLIM2-207ENST00000409417 TRAV36DV7A0A075B6V5 113 aa17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 ZNF716A6NP11 495 aa17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 FTCDNL1E5RQL4 147 aa17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 OR2T1O43869 369 aa17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 RAMP1O60894 148 aa17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 LYPD3O95274 346 aa17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 THY1P04216 161 aa17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 TCN1P20061 433 aaPredicted RBP17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 RPS5P46782 204 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 SORDQ00796 357 aa17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 FAM69AQ5T7M9 428 aa17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 DEF8Q6ZN54 512 aa17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 NUFIP2Q7Z417 695 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 GALNT5Q7Z7M9 940 aa17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 TAAR8Q969N4 342 aa17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 MARVELD3Q96A59 401 aa17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 MPP4Q96JB8 637 aa17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 EPYCQ99645 322 aa17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 GORASP2Q9H8Y8 452 aa17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 RPS6KA6Q9UK32 745 aa17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 NBPF19A0A087WUL8 3843 aa17.65■□□□□ 0.42
PDLIM2-207ENST00000409417 AQP7P3A6NL99 342 aa17.64■□□□□ 0.41
PDLIM2-207ENST00000409417 GPR171O14626 319 aa17.64■□□□□ 0.41
PDLIM2-207ENST00000409417 FZD7O75084 574 aa17.64■□□□□ 0.41
PDLIM2-207ENST00000409417 AKR7A3O95154 331 aa17.64■□□□□ 0.41
PDLIM2-207ENST00000409417 OTUD3Q5T2D3 398 aaPredicted RBP17.64■□□□□ 0.41
PDLIM2-207ENST00000409417 STK32CQ86UX6 486 aa17.64■□□□□ 0.41
PDLIM2-207ENST00000409417 P3H2Q8IVL5 708 aa17.64■□□□□ 0.41
PDLIM2-207ENST00000409417 ARHGAP24Q8N264 748 aa17.64■□□□□ 0.41
PDLIM2-207ENST00000409417 TMEM99Q8N816 258 aa17.64■□□□□ 0.41
PDLIM2-207ENST00000409417 OR6S1Q8NH40 331 aa17.64■□□□□ 0.41
PDLIM2-207ENST00000409417 GEMIN6Q8WXD5 167 aaKnown RBP17.64■□□□□ 0.41
PDLIM2-207ENST00000409417 SLC41A3Q96GZ6 507 aa17.64■□□□□ 0.41
PDLIM2-207ENST00000409417 HSH2DQ96JZ2 352 aa17.64■□□□□ 0.41
PDLIM2-207ENST00000409417 ZNF300Q96RE9 604 aaPredicted RBP17.64■□□□□ 0.41
PDLIM2-207ENST00000409417 C12orf49Q9H741 205 aa17.64■□□□□ 0.41
PDLIM2-207ENST00000409417 DCAF13Q9NV06 445 aaKnown RBP17.64■□□□□ 0.41
PDLIM2-207ENST00000409417 ELOVL5Q9NYP7 299 aa17.64■□□□□ 0.41
PDLIM2-207ENST00000409417 MAGEL2Q9UJ55 1249 aa17.64■□□□□ 0.41
PDLIM2-207ENST00000409417 SLC7A7Q9UM01 511 aa17.64■□□□□ 0.41
PDLIM2-207ENST00000409417 ITPR2Q14571 2701 aa17.64■□□□□ 0.41
PDLIM2-207ENST00000409417 OR5F1O95221 314 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 CD79BP40259 229 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 TAS2R41P59536 307 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 SLC17A1Q14916 467 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 RINLQ6ZS11 566 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 FKBP9P1Q75LS8 142 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 GDF7Q7Z4P5 450 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 ABCA12Q86UK0 2595 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 ZNF775Q96BV0 537 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 SLC25A36Q96CQ1 311 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 ZNF426Q9BUY5 554 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 SF3B5Q9BWJ5 86 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 C1orf21Q9H246 121 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 DCHS2Q6V1P9 2916 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 VAMP5O95183 116 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 IFNW1P05000 195 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 THRBP10828 461 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 MSX2P35548 267 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 P2RY4P51582 365 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 PIN1Q13526 163 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 MFSD13AQ14CX5 517 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 IFI44LQ53G44 452 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 TFAP2EQ6VUC0 442 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 WDR88Q6ZMY6 472 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 SLC19A3Q9BZV2 496 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 RIMS3Q9UJD0 308 aa17.63■□□□□ 0.41
PDLIM2-207ENST00000409417 UBOX5O94941 541 aa17.62■□□□□ 0.41
PDLIM2-207ENST00000409417 GTF2E2P29084 291 aaKnown RBP17.62■□□□□ 0.41
PDLIM2-207ENST00000409417 KIR2DL3P43628 341 aa17.62■□□□□ 0.41
PDLIM2-207ENST00000409417 OR3A2P47893 321 aa17.62■□□□□ 0.41
PDLIM2-207ENST00000409417 FAM27E3Q08E93 113 aa17.62■□□□□ 0.41
PDLIM2-207ENST00000409417 SNTB1Q13884 538 aaKnown RBP17.62■□□□□ 0.41
PDLIM2-207ENST00000409417 TMEM225Q6GV28 225 aa17.62■□□□□ 0.41
PDLIM2-207ENST00000409417 BEND4Q6ZU67 534 aa17.62■□□□□ 0.41
PDLIM2-207ENST00000409417 AMBRA1Q9C0C7 1298 aa17.62■□□□□ 0.41
PDLIM2-207ENST00000409417 TAS2R1Q9NYW7 299 aa17.62■□□□□ 0.41
PDLIM2-207ENST00000409417 KCNN3Q9UGI6 736 aa17.62■□□□□ 0.41
PDLIM2-207ENST00000409417 SAMD4AQ9UPU9 718 aaKnown RBP17.62■□□□□ 0.41
PDLIM2-207ENST00000409417 B3GALT5Q9Y2C3 310 aa17.62■□□□□ 0.41
PDLIM2-207ENST00000409417 CORINQ9Y5Q5 1042 aa17.62■□□□□ 0.41
PDLIM2-207ENST00000409417 SNX13Q9Y5W8 968 aa17.62■□□□□ 0.41
PDLIM2-207ENST00000409417 TUBAL3A6NHL2 446 aa17.61■□□□□ 0.41
PDLIM2-207ENST00000409417 ARPC2O15144 300 aa17.61■□□□□ 0.41
PDLIM2-207ENST00000409417 POU2F1P14859 743 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms