RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 SLC14A2Q15849 920 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 CTSL3PQ5NE16 218 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 PRICKLE2Q7Z3G6 844 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 ADIPOR2Q86V24 386 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 SVBPQ8N300 66 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 CBARPQ8N350 705 aaPredicted RBP11.25□□□□□ -0.61
SMCR8-201ENST00000406438 FAM71E2Q8N5Q1 922 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 ACOT11Q8WXI4 607 aaPredicted RBP11.25□□□□□ -0.61
SMCR8-201ENST00000406438 ZNF300Q96RE9 604 aaPredicted RBP11.25□□□□□ -0.61
SMCR8-201ENST00000406438 FAM212BQ9NTI7 297 aaPredicted RBP11.25□□□□□ -0.61
SMCR8-201ENST00000406438 NPIPA5A0A0B4J1W7 369 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 CDC14CA4D256 554 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 NPIPA7E9PJI5 369 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 M0QZQ0 153 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 IMPA2O14732 288 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 GALR3O60755 368 aaPredicted RBP11.25□□□□□ -0.61
SMCR8-201ENST00000406438 MT-ND4P03905 459 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 HOXB5P09067 269 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 NPIPA8P0DM63 369 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 ACPPP15309 386 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 AHRP35869 848 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 AKR1C1Q04828 323 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 SOX4Q06945 474 aaPredicted RBP11.25□□□□□ -0.61
SMCR8-201ENST00000406438 CATR1Q13166 79 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 EXOSC7Q15024 291 aaKnown RBP11.25□□□□□ -0.61
SMCR8-201ENST00000406438 ELOVL3Q9HB03 270 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 ZNF264O43296 627 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 HNRNPFP52597 415 aaKnown RBP11.25□□□□□ -0.61
SMCR8-201ENST00000406438 RNLSQ5VYX0 342 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.25□□□□□ -0.613e-13■■■■■ 63.9
SMCR8-201ENST00000406438 GLB1L2Q8IW92 636 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 NTMT1Q9BV86 223 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 DDX31Q9H8H2 851 aaKnown RBP11.25□□□□□ -0.61
SMCR8-201ENST00000406438 RASD1Q9Y272 281 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 F6UZH7 168 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 CT45A6P0DMU7 189 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 CT45A5P0DMU8 189 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 CT45A7P0DMV0 189 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 CT45A8P0DMV1 189 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 CT45A9P0DMV2 189 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 MRPS34P82930 218 aaKnown RBP11.25□□□□□ -0.61
SMCR8-201ENST00000406438 HMGN3Q15651 99 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 CT45A2Q5DJT8 189 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 CT45A1Q5HYN5 189 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 ZNF691Q5VV52 312 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 OPN5Q6U736 354 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 CD300LGQ6UXG3 332 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 CT45A3Q8NHU0 189 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 CLSTN3Q9BQT9 956 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 SMIM3Q9BZL3 60 aa11.25□□□□□ -0.61
SMCR8-201ENST00000406438 ZNF587BE7ETH6 402 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 TNFRSF10AO00220 468 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 PRSS56P0CW18 603 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 ANXA7P20073 488 aaKnown RBP11.24□□□□□ -0.61
SMCR8-201ENST00000406438 HIST1H1TP22492 207 aaPredicted RBP11.24□□□□□ -0.61
SMCR8-201ENST00000406438 GABRA5P31644 462 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 ZP2Q05996 745 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 MRPL2Q5T653 305 aaKnown RBP11.24□□□□□ -0.61
SMCR8-201ENST00000406438 MEX3DQ86XN8 651 aaKnown RBP11.24□□□□□ -0.61
SMCR8-201ENST00000406438 ANKRD60Q9BZ19 345 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 LINC00597Q9H2U6 94 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 CHD5Q8TDI0 1954 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 SLC22A23A1A5C7 686 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 DDAH2O95865 285 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 SCGB1D1O95968 90 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 CPMP14384 443 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 UBE2G2P60604 165 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 DCDP81605 110 aaKnown RBP11.24□□□□□ -0.61
SMCR8-201ENST00000406438 IKZF1Q13422 519 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 TTC9BQ8N6N2 239 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 OR6C1Q96RD1 312 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 TCEAL2Q9H3H9 227 aaPredicted RBP11.24□□□□□ -0.61
SMCR8-201ENST00000406438 NOSIPQ9Y314 301 aaKnown RBP11.24□□□□□ -0.61
SMCR8-201ENST00000406438 ZNF701M0R085 212 aaPredicted RBP11.24□□□□□ -0.61
SMCR8-201ENST00000406438 HOXC13P31276 330 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 TNK1Q13470 666 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 IL20RBQ6UXL0 311 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 TMEM163Q8TC26 289 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 GABRR3A8MPY1 467 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 SNCAP37840 140 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 PM20D1Q6GTS8 502 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 DESI1Q6ICB0 168 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 NAA40Q86UY6 237 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 LMO3Q8TAP4 145 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 GIMAP1Q8WWP7 306 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 METTL15A6NJ78 407 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 WASH4PA8MWX3 477 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 G3V2L1 256 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 MITFO75030 526 aaPredicted RBP11.24□□□□□ -0.61
SMCR8-201ENST00000406438 FZD7O75084 574 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 ARAFP10398 606 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 PRKACBP22694 351 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 HOXA11P31270 313 aaPredicted RBP11.24□□□□□ -0.61
SMCR8-201ENST00000406438 DLX5P56178 289 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 MRPS21P82921 87 aaKnown RBP11.24□□□□□ -0.61
SMCR8-201ENST00000406438 RBMS2Q15434 407 aaKnown RBP11.24□□□□□ -0.61
SMCR8-201ENST00000406438 LTB4RQ15722 352 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 LPCAT3Q6P1A2 487 aa11.24□□□□□ -0.61
SMCR8-201ENST00000406438 RBMS3Q6XE24 437 aaKnown RBP11.24□□□□□ -0.61
SMCR8-201ENST00000406438 FER1L6-AS2Q96M78 137 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms