RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 NPAS1Q99742 590 aa9.46□□□□□ -0.9
RPAIN-204ENST00000405578 TM9SF2Q99805 663 aa9.46□□□□□ -0.9
RPAIN-204ENST00000405578 VKORC1Q9BQB6 163 aa9.46□□□□□ -0.9
RPAIN-204ENST00000405578 PRR14Q9BWN1 585 aa9.46□□□□□ -0.9
RPAIN-204ENST00000405578 POTEKPQ9BYX7 375 aa9.46□□□□□ -0.9
RPAIN-204ENST00000405578 SLC19A3Q9BZV2 496 aa9.46□□□□□ -0.9
RPAIN-204ENST00000405578 AMBRA1Q9C0C7 1298 aa9.46□□□□□ -0.9
RPAIN-204ENST00000405578 KLHL4Q9C0H6 718 aa9.46□□□□□ -0.9
RPAIN-204ENST00000405578 CALHM2Q9HA72 323 aa9.46□□□□□ -0.9
RPAIN-204ENST00000405578 IL1RAPQ9NPH3 570 aa9.46□□□□□ -0.9
RPAIN-204ENST00000405578 NPDC1Q9NQX5 325 aaPredicted RBP9.46□□□□□ -0.9
RPAIN-204ENST00000405578 RIMS3Q9UJD0 308 aa9.46□□□□□ -0.9
RPAIN-204ENST00000405578 SLC7A7Q9UM01 511 aa9.46□□□□□ -0.9
RPAIN-204ENST00000405578 TRAPPC4Q9Y296 219 aa9.46□□□□□ -0.9
RPAIN-204ENST00000405578 ZNF175Q9Y473 711 aa9.46□□□□□ -0.9
RPAIN-204ENST00000405578 ENPP4Q9Y6X5 453 aa9.46□□□□□ -0.9
RPAIN-204ENST00000405578 PHF3Q92576 2039 aaKnown RBP9.46□□□□□ -0.9
RPAIN-204ENST00000405578 TRAV36DV7A0A075B6V5 113 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 A0A0J9YW62 118 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 TMEM72A0PK05 275 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 SLC22A20A6NK97 555 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 CLCA1A8K7I4 914 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 KIAA1324LA8MWY0 1029 aaPredicted RBP9.45□□□□□ -0.9
RPAIN-204ENST00000405578 ZNHIT1O43257 154 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 CXCL13O43927 109 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 TPST2O60704 377 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 RAP2AP10114 183 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 FOSL1P15407 271 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 RBM34P42696 430 aaKnown RBP9.45□□□□□ -0.9
RPAIN-204ENST00000405578 YAP1P46937 504 aaKnown RBP9.45□□□□□ -0.9
RPAIN-204ENST00000405578 DIO1P49895 249 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 SUCLG1P53597 346 aaKnown RBP9.45□□□□□ -0.9
RPAIN-204ENST00000405578 OR2B6P58173 313 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 RAC3P60763 192 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 SLC35A1P78382 337 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 MYBPHQ13203 477 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 MFSD13AQ14CX5 517 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 TRAM2Q15035 370 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 EMC4Q5J8M3 183 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 C1orf140Q5VVS0 124 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 NSUN5P2Q63ZY6 315 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 RRM2BQ7LG56 351 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 ZDHHC21Q8IVQ6 265 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 OFCC1Q8IZS5 231 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 C10orf53Q8N6V4 93 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 NINJ1Q92982 152 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 WNT2BQ93097 391 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 ZNF524Q96C55 264 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 PIP5K1AQ99755 562 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 SMR3AQ99954 134 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 TUBA1CQ9BQE3 449 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 WFDC6Q9BQY6 131 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 NAA11Q9BSU3 229 aaPredicted RBP9.45□□□□□ -0.9
RPAIN-204ENST00000405578 TMEM43Q9BTV4 400 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 OR11A1Q9GZK7 315 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 ANKRD19PQ9H560 264 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 KRCC1Q9NPI7 259 aaPredicted RBP9.45□□□□□ -0.9
RPAIN-204ENST00000405578 COQ3Q9NZJ6 369 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 NDUFAF4Q9P032 175 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 C6orf203Q9P0P8 240 aaPredicted RBP9.45□□□□□ -0.9
RPAIN-204ENST00000405578 AURKCQ9UQB9 309 aa9.45□□□□□ -0.9
RPAIN-204ENST00000405578 HRNRQ86YZ3 2850 aaPredicted RBP9.45□□□□□ -0.9
RPAIN-204ENST00000405578 COL6A5A8TX70 2615 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 A0A1W2PNR3 127 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 TCRBV5S2A0A599 114 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 HTR3EA5X5Y0 456 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 FAM90A27PA6NNH2 459 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 H0YC42 278 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 hCG_2039718K7EN88 272 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 EFNA2O43921 213 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 KRT36O76013 467 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 PMS2P2O95744 297 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 PLGP00747 810 aaPredicted RBP9.44□□□□□ -0.9
RPAIN-204ENST00000405578 IL2RAP01589 272 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 H1F0P07305 194 aaKnown RBP9.44□□□□□ -0.9
RPAIN-204ENST00000405578 ENPP1P22413 925 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 TPD52P55327 224 aaPredicted RBP9.44□□□□□ -0.9
RPAIN-204ENST00000405578 NUP107P57740 925 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 VLDLRP98155 873 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 PON3Q15166 354 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 CTU2Q2VPK5 515 aaKnown RBP9.44□□□□□ -0.9
RPAIN-204ENST00000405578 FGD3Q5JSP0 725 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 FAM69AQ5T7M9 428 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 EEF1A1P5Q5VTE0 462 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 PIWIL3Q7Z3Z3 882 aaKnown RBP9.44□□□□□ -0.9
RPAIN-204ENST00000405578 BIVMQ86UB2 503 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 PRIMA1Q86XR5 153 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 CDK20Q8IZL9 346 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 SLC43A2Q8N370 569 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 FAM86B1Q8N7N1 296 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 PIK3C3Q8NEB9 887 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 TMEM239Q8WW34 195 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 RND1Q92730 232 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 ADGRG7Q96K78 797 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 C7orf34Q96L11 122 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 ZFP3Q96NJ6 502 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 UCN2Q96RP3 112 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 DMRTA2Q96SC8 542 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 TTYH2Q9BSA4 534 aa9.44□□□□□ -0.9
RPAIN-204ENST00000405578 NMNAT1Q9HAN9 279 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 199 ms