RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 PLPP2O43688 288 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 FGF5P12034 268 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 CCL4P13236 92 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 FUT1P19526 365 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 RBMS1P29558 406 aaKnown RBP14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 MAP3K8P41279 467 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 POU6F2P78424 691 aaPredicted RBP14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 YIF1BQ5BJH7 314 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 RAB11FIP2Q7L804 512 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 CREB3L1Q96BA8 519 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 FAM122AQ96E09 287 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ART5Q96L15 291 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 TBX5Q99593 518 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 TEAD3Q99594 435 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 TRAF4Q9BUZ4 470 aaPredicted RBP14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 HCAR1Q9BXC0 346 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 NIPAL2Q9H841 368 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 LOXL2Q9Y4K0 774 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 CCDC187A0A096LP49 1063 aa14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ZNF860A6NHJ4 632 aa14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 AGRPO00253 132 aa14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 FGF17O60258 216 aa14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 BRINP1O60477 761 aa14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 SAGP10523 405 aaPredicted RBP14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ZNF3P17036 446 aa14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 RFX3P48380 749 aa14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 RPS7P62081 194 aaKnown RBP14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ACTC1P68032 377 aa14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ACTA1P68133 377 aa14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 FAM53BQ14153 422 aa14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 YOD1Q5VVQ6 348 aaPredicted RBP14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ZNF57Q68EA5 555 aaPredicted RBP14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 THSD4Q6ZMP0 1018 aa14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 NR2C2APQ86WQ0 139 aa14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 PPP1R3BQ86XI6 285 aa14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 GRPEL2Q8TAA5 225 aa14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 PTP4A1Q93096 173 aa14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 HAO2Q9NYQ3 351 aa14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 BOLA1Q9Y3E2 137 aa14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 CLCA3PQ9Y6N3 262 aa14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 CNOT1A5YKK6 2376 aaKnown RBP14.59□□□□□ -0.07
CHRFAM7A-203ENST00000401522 NPIPA5A0A0B4J1W7 369 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 DCDC2BA2VCK2 349 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 NPIPA7E9PJI5 369 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 DVL2O14641 736 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 HYAL3O43820 417 aaPredicted RBP14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 REM1O75628 298 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 SOX30O94993 753 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 SBK2P0C263 348 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 NPIPA8P0DM63 369 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 SLC2A5P22732 501 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 PLA2G5P39877 138 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ATP12AP54707 1039 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 POU4F2Q12837 409 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 PRICKLE4Q2TBC4 344 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 C6orf183Q5T699 404 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ARL9Q6T311 187 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 GLCCI1Q86VQ1 547 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 YIPF7Q8N8F6 280 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ZFAND1Q8TCF1 268 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 UPRTQ96BW1 309 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 BEX2Q9BXY8 128 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 HDHD2Q9H0R4 259 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 PLSCR3Q9NRY6 295 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 FBXO34Q9NWN3 711 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ING3Q9NXR8 418 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 MAT2BQ9NZL9 334 aa14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 MRPS2Q9Y399 296 aaKnown RBP14.58□□□□□ -0.07
CHRFAM7A-203ENST00000401522 A0A0G2JMP0 313 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 A0A0X1KG70 313 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 OR6C70A6NIJ9 312 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 CYR61O00622 381 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 CHP2O43745 196 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 LDB3O75112 727 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 PTP4A3O75365 173 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 IFNGP01579 166 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 HK1P19367 917 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 NPR2P20594 1047 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 DRD5P21918 477 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 SHC1P29353 583 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 GABRA3P34903 492 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 THBS2P35442 1172 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 RBM34P42696 430 aaKnown RBP14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 RAB25P57735 213 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 BTG1P62324 171 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 MGAT2Q10469 447 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 HACD4Q5VWC8 232 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 FIGNL1Q6PIW4 674 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 TMPRSS7Q7RTY8 843 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 OAFQ86UD1 273 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 TEX19Q8NA77 164 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 OR4M2Q8NGB6 313 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 ABHD4Q8TB40 342 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 RFT1Q96AA3 541 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 WACQ9BTA9 647 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 GON7Q9BXV9 100 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 OR51V1Q9H2C8 321 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 FOLH1BQ9HBA9 442 aa14.58□□□□□ -0.08
CHRFAM7A-203ENST00000401522 ADGRL4Q9HBW9 690 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms