RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 BARHL1Q9BZE3 327 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 SUV39H2Q9H5I1 410 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 TMED3Q9Y3Q3 217 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 MRPL42Q9Y6G3 142 aaKnown RBP9.29□□□□□ -0.92
PTPRM-203ENST00000400060 ALS2Q96Q42 1657 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 OR12D1P0DN82 309 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 CCINQ13939 588 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 RNF151Q2KHN1 245 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 CHRFAM7AQ494W8 412 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 PRAMEF8Q5VWM4 474 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 PRAMEF7Q5VXH5 474 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 MRM1Q6IN84 353 aaKnown RBP9.29□□□□□ -0.92
PTPRM-203ENST00000400060 CPXM2Q8N436 756 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 ZNF485Q8NCK3 441 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 ZNF514Q96K75 400 aaPredicted RBP9.29□□□□□ -0.92
PTPRM-203ENST00000400060 PNO1Q9NRX1 252 aaKnown RBP9.29□□□□□ -0.92
PTPRM-203ENST00000400060 STEAP1Q9UHE8 339 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 FBXO10Q9UK96 956 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 UTS2RQ9UKP6 389 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 KIAA1551Q9HCM1 1747 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 FAM74A7A6NL05 159 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 EMC8O43402 210 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 BRINP1O60477 761 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 GP1BAP07359 652 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 ZNF25P17030 456 aaPredicted RBP9.29□□□□□ -0.92
PTPRM-203ENST00000400060 DHODHQ02127 395 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 UPP1Q16831 310 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 FAM74A3Q4VXF1 159 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 DNLZQ5SXM8 178 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 NSUN5P2Q63ZY6 315 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 CBLN2Q8IUK8 224 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 FAM185AQ8N0U4 392 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 OR9K2Q8NGE7 335 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 LIN37Q96GY3 246 aaPredicted RBP9.29□□□□□ -0.92
PTPRM-203ENST00000400060 TECTBQ96PL2 329 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 C11orf84Q9BUA3 381 aaPredicted RBP9.29□□□□□ -0.92
PTPRM-203ENST00000400060 SUCNR1Q9BXA5 334 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 COA4Q9NYJ1 87 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 SPG21Q9NZD8 308 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 PHLPP1O60346 1717 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 C20orf202A1L168 122 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 KDM4EB2RXH2 506 aaPredicted RBP9.29□□□□□ -0.92
PTPRM-203ENST00000400060 ZNF823P16415 610 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 TBPP20226 339 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 GUK1Q16774 197 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 GGNBP1Q5YKI7 109 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 KIAA0907Q7Z7F0 614 aaPredicted RBP9.29□□□□□ -0.92
PTPRM-203ENST00000400060 CMBLQ96DG6 245 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 SAMD8Q96LT4 415 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 KCNJ15Q99712 375 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 SIRT7Q9NRC8 400 aa9.29□□□□□ -0.92
PTPRM-203ENST00000400060 A0A1W2PPK0 400 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 GABRR3A8MPY1 467 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 J3KTA2 159 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 NFKBIEO00221 500 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 SMAD6O43541 496 aaKnown RBP9.28□□□□□ -0.92
PTPRM-203ENST00000400060 SLC25A4P12235 298 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 SELENOPP49908 381 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 TAF9Q16594 264 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 PSAPL1Q6NUJ1 521 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 SGPP2Q8IWX5 399 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 COX18Q8N8Q8 333 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 NCOR1P1Q9H4R4 102 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 C1orf123Q9NWV4 160 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 RBPJLQ9UBG7 517 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 ING1Q9UK53 422 aaPredicted RBP9.28□□□□□ -0.92
PTPRM-203ENST00000400060 CARHSP1Q9Y2V2 147 aaKnown RBP9.28□□□□□ -0.92
PTPRM-203ENST00000400060 A6NIN4 97 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 PLGP00747 810 aaPredicted RBP9.28□□□□□ -0.92
PTPRM-203ENST00000400060 IGHA2P01877 340 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 METTL15P1P0C7V9 234 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 SMPD1P17405 629 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 AMY2BP19961 511 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 NFYBP25208 207 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 SPOCK1Q08629 439 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 TEAD2Q15562 447 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 GXYLT1Q4G148 440 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 PRAMEF14Q5SWL7 426 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 AFMIDQ63HM1 303 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 TNFRSF12AQ9NP84 129 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 ADAMTS7Q9UKP4 1686 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 ANKRD61A6NGH8 418 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 TBL1XO60907 577 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 CRYABP02511 175 aaKnown RBP9.28□□□□□ -0.92
PTPRM-203ENST00000400060 FOLR2P14207 255 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 S1PR1P21453 382 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 HMGA2P52926 109 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 PCBP4P57723 403 aaKnown RBP9.28□□□□□ -0.92
PTPRM-203ENST00000400060 SIRPAP78324 504 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 MAP4K2Q12851 820 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 DOC2AQ14183 400 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 CD300LGQ6UXG3 332 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 ZNF467Q7Z7K2 595 aaPredicted RBP9.28□□□□□ -0.92
PTPRM-203ENST00000400060 OR1S1Q8NH92 325 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 MS4A3Q96HJ5 214 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 SDHCQ99643 169 aaPredicted RBP9.28□□□□□ -0.92
PTPRM-203ENST00000400060 ZDHHC6Q9H6R6 413 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 CHRNA9Q9UGM1 479 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 HSBP1L1C9JCN9 74 aa9.28□□□□□ -0.92
PTPRM-203ENST00000400060 ZNF878C9JN71 531 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms