RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 FUT1P19526 365 aa8.28□□□□□ -1.08
PTPRM-202ENST00000400053 EPHA1P21709 976 aa8.28□□□□□ -1.08
PTPRM-202ENST00000400053 TMEM25Q86YD3 366 aa8.28□□□□□ -1.08
PTPRM-202ENST00000400053 OR10K1Q8NGX5 313 aa8.28□□□□□ -1.08
PTPRM-202ENST00000400053 ST7LQ8TDW4 575 aa8.28□□□□□ -1.08
PTPRM-202ENST00000400053 ELP4Q96EB1 424 aa8.28□□□□□ -1.08
PTPRM-202ENST00000400053 RTP3Q9BQQ7 232 aa8.28□□□□□ -1.08
PTPRM-202ENST00000400053 PITHD1Q9GZP4 211 aaPredicted RBP8.28□□□□□ -1.08
PTPRM-202ENST00000400053 SFXN1Q9H9B4 322 aa8.28□□□□□ -1.08
PTPRM-202ENST00000400053 A0A1W2PP55 124 aa8.27□□□□□ -1.08
PTPRM-202ENST00000400053 IGLON5A6NGN9 336 aa8.27□□□□□ -1.08
PTPRM-202ENST00000400053 TK1P04183 234 aa8.27□□□□□ -1.08
PTPRM-202ENST00000400053 SHC1P29353 583 aa8.27□□□□□ -1.08
PTPRM-202ENST00000400053 IL2RGP31785 369 aa8.27□□□□□ -1.08
PTPRM-202ENST00000400053 SLC14A1Q13336 389 aa8.27□□□□□ -1.08
PTPRM-202ENST00000400053 PGGHGQ32M88 737 aa8.27□□□□□ -1.08
PTPRM-202ENST00000400053 VASNQ6EMK4 673 aa8.27□□□□□ -1.08
PTPRM-202ENST00000400053 GDPD3Q7L5L3 318 aa8.27□□□□□ -1.08
PTPRM-202ENST00000400053 PGBD5Q8N414 524 aa8.27□□□□□ -1.08
PTPRM-202ENST00000400053 OR11L1Q8NGX0 322 aa8.27□□□□□ -1.08
PTPRM-202ENST00000400053 CHTF18Q8WVB6 975 aa8.27□□□□□ -1.08
PTPRM-202ENST00000400053 RBMXL1Q96E39 390 aaKnown RBP8.27□□□□□ -1.08
PTPRM-202ENST00000400053 MS4A4EQ96PG1 132 aa8.27□□□□□ -1.08
PTPRM-202ENST00000400053 UHRF1Q96T88 793 aaPredicted RBP8.27□□□□□ -1.08
PTPRM-202ENST00000400053 ZNF416Q9BWM5 594 aa8.27□□□□□ -1.08
PTPRM-202ENST00000400053 ACAD8Q9UKU7 415 aa8.27□□□□□ -1.08
PTPRM-202ENST00000400053 SLC35A3Q9Y2D2 325 aa8.27□□□□□ -1.08
PTPRM-202ENST00000400053 DLEC1Q9Y238 1755 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 TRAV27A0A087WT01 109 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 A0A1W2PQU0 124 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 TSPAN11A1L157 253 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 BLACEA4D250 179 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 AGAP14A8MT82 685 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 C5AR1P21730 350 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 GDNFP39905 211 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 TAS2R46P59540 309 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 RPS27AP62979 156 aaKnown RBP8.27□□□□□ -1.09
PTPRM-202ENST00000400053 UBA52P62987 128 aaKnown RBP8.27□□□□□ -1.09
PTPRM-202ENST00000400053 PLK5Q496M5 336 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 BPIFA2Q96DR5 249 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 NIPSNAP1Q9BPW8 284 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 ST6GALNAC5Q9BVH7 336 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 TUBB1Q9H4B7 451 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 CWH43Q9H720 699 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 ACKR4Q9NPB9 350 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 NPAP1Q9NZP6 1156 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 CLEC2DQ9UHP7 191 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 J3QR89 54 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 HLA-AP01891 365 aaKnown RBP8.27□□□□□ -1.09
PTPRM-202ENST00000400053 TCRBP04435 133 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 SCG5P05408 212 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 FABP1P07148 127 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 APEHP13798 732 aaKnown RBP8.27□□□□□ -1.09
PTPRM-202ENST00000400053 TGFBR1P36897 503 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 RPS19P39019 145 aaKnown RBP8.27□□□□□ -1.09
PTPRM-202ENST00000400053 RABIFP47224 123 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 ISL1P61371 349 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 RNF4P78317 190 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 FIGLAQ6QHK4 219 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 LACC1Q8IV20 430 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 HAS2Q92819 552 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 SERINC2Q96SA4 455 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 ZIC5Q96T25 663 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 AMBRA1Q9C0C7 1298 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 GFOD1Q9NXC2 390 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 SAGE1Q9NXZ1 904 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 SCN9AQ15858 1988 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 IGLV3-10A0A075B6K4 115 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 ZNF891A8MT65 544 aaPredicted RBP8.27□□□□□ -1.09
PTPRM-202ENST00000400053 SLC43A1O75387 559 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 GABRA5P31644 462 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 CSNK1DP48730 415 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 PPT1P50897 306 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 P2RX1P51575 399 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 CCR6P51684 374 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 EPHA4P54764 986 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 ERVFC1P60507 584 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 GAB1Q13480 694 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 OTUD1Q5VV17 481 aaPredicted RBP8.27□□□□□ -1.09
PTPRM-202ENST00000400053 SLX4IPQ5VYV7 408 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 ANKRD34AQ69YU3 496 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.27□□□□□ -1.09
PTPRM-202ENST00000400053 PTRH1Q86Y79 214 aaKnown RBP8.27□□□□□ -1.09
PTPRM-202ENST00000400053 ZNF679Q8IYX0 411 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 PELI3Q8N2H9 469 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 CPXM2Q8N436 756 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 TEX19Q8NA77 164 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 IL17RDQ8NFM7 739 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 OR1E3Q8WZA6 343 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 RBPMSQ93062 196 aaKnown RBP8.27□□□□□ -1.09
PTPRM-202ENST00000400053 ISG20Q96AZ6 181 aaKnown RBP8.27□□□□□ -1.09
PTPRM-202ENST00000400053 SDSLQ96GA7 329 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 MAP3K3Q99759 626 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 CTRCQ99895 268 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 CNTNAP3Q9BZ76 1288 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 MED20Q9H944 212 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 DYNLRB1Q9NP97 96 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 PLEK2Q9NYT0 353 aa8.27□□□□□ -1.09
PTPRM-202ENST00000400053 TESQ9UGI8 421 aaKnown RBP8.27□□□□□ -1.09
PTPRM-202ENST00000400053 OR2A25A4D2G3 310 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 262 ms