RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 TLX2O43763 284 aaPredicted RBP10.57□□□□□ -0.72
SKA3-203ENST00000400018 IFI6P09912 130 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 CXCR1P25024 350 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 SLC1A3P43003 542 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 ISL1P61371 349 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 SRYQ05066 204 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 RNFT1Q5M7Z0 435 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 RAET1LQ5VY80 246 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 WBP2NLQ6ICG8 309 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 TTC33Q6PID6 262 aaPredicted RBP10.57□□□□□ -0.72
SKA3-203ENST00000400018 OPN5Q6U736 354 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 NUP54Q7Z3B4 507 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.57□□□□□ -0.72
SKA3-203ENST00000400018 OAFQ86UD1 273 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 SULF2Q8IWU5 870 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 LSMEM1Q8N8F7 131 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 TSSK2Q96PF2 358 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 LHPPQ9H008 270 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 OR52D1Q9H346 318 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 USE1Q9NZ43 259 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 ZMIZ1Q9ULJ6 1067 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 WBP4O75554 376 aaKnown RBP10.57□□□□□ -0.72
SKA3-203ENST00000400018 GP1BBP13224 206 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 ANXA8P13928 327 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 RAD23AP54725 363 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 ERVK-25P63136 954 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 C17orf67Q0P5P2 114 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 CDC20Q12834 499 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 CBFBQ13951 182 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 DOC2BQ14184 412 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 SPACA3Q8IXA5 215 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 TSPAN14Q8NG11 270 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 ZNRF4Q8WWF5 429 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 RASD2Q96D21 266 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 NXPE2Q96DL1 559 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 ANKRD60Q9BZ19 345 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 TRIM2Q9C040 744 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 HOXD1Q9GZZ0 328 aa10.57□□□□□ -0.72
SKA3-203ENST00000400018 P04436 131 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 EEF1B2P24534 225 aaKnown RBP10.56□□□□□ -0.72
SKA3-203ENST00000400018 DPP4P27487 766 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 NOS3P29474 1203 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 MAGEA5P43359 124 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 CLDN20P56880 219 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 ARG2P78540 354 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 AIMP2Q13155 320 aaKnown RBP10.56□□□□□ -0.72
SKA3-203ENST00000400018 EFR3AQ14156 821 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 OR7A5Q15622 319 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 SLC46A3Q7Z3Q1 461 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.56□□□□□ -0.72
SKA3-203ENST00000400018 CLVS1Q8IUQ0 354 aaPredicted RBP10.56□□□□□ -0.72
SKA3-203ENST00000400018 TOR1AIP2Q8NFQ8 470 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 OR9Q1Q8NGQ5 310 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 OR1J4Q8NGS1 313 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 FANK1Q8TC84 345 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 PAQR8Q8TEZ7 354 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 C5orf34Q96MH7 638 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 DEFB127Q9H1M4 99 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 CCDC86Q9H6F5 360 aaKnown RBP10.56□□□□□ -0.72
SKA3-203ENST00000400018 KLHL13Q9P2N7 655 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 POFUT2Q9Y2G5 429 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 KCNMB2Q9Y691 235 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 LRRC3CA6NJW4 275 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 EFCAB9A8MZ26 197 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 SULT1C4O75897 302 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 AKR7A3O95154 331 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 IGHEP01854 428 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 OSMP13725 252 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 TXNL4AP83876 142 aaKnown RBP10.56□□□□□ -0.72
SKA3-203ENST00000400018 HSF1Q00613 529 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 MELKQ14680 651 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 PLPPR5Q32ZL2 321 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 TMEM176BQ3YBM2 270 aaPredicted RBP10.56□□□□□ -0.72
SKA3-203ENST00000400018 ZNF691Q5VV52 312 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 ZNF613Q6PF04 617 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 USP51Q70EK9 711 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 CCNL2Q96S94 520 aaPredicted RBP10.56□□□□□ -0.72
SKA3-203ENST00000400018 CCDC90BQ9GZT6 254 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 MCCC2Q9HCC0 563 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 NDRG4Q9ULP0 352 aaKnown RBP10.56□□□□□ -0.72
SKA3-203ENST00000400018 ZNF337Q9Y3M9 751 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 LIPGQ9Y5X9 500 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 EPG5Q9HCE0 2579 aa10.56□□□□□ -0.72
SKA3-203ENST00000400018 FREM1Q5H8C1 2179 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 LOC105371267A0A1B0GV96 52 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 TP53I11O14683 189 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 ZIC3O60481 467 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 DXOO77932 396 aaKnown RBP10.55□□□□□ -0.72
SKA3-203ENST00000400018 PGCP20142 388 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 RPS27P42677 84 aaKnown RBP10.55□□□□□ -0.72
SKA3-203ENST00000400018 CDK5R2Q13319 367 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 ITGADQ13349 1161 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 H3F3CQ6NXT2 135 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 LINC00114Q6XXX2 140 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 C8orf59Q8N0T1 100 aaPredicted RBP10.55□□□□□ -0.72
SKA3-203ENST00000400018 PACRGLQ8N7B6 248 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 SDR9C7Q8NEX9 313 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 OR4K13Q8NH42 304 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 C12orf43Q96C57 262 aaKnown RBP10.55□□□□□ -0.72
SKA3-203ENST00000400018 OR5B2Q96R09 309 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms