RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 THEM6Q8WUY1 208 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 BPIFA2Q96DR5 249 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 NUS1Q96E22 293 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 ELP4Q96EB1 424 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 MRPS24Q96EL2 167 aaKnown RBP9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 CHST6Q9GZX3 395 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 AICDAQ9GZX7 198 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 ADGRL4Q9HBW9 690 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 SLC39A1Q9NY26 324 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 GMEB2Q9UKD1 530 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 ERVK-19Q9WJR5 959 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 NPFFR2Q9Y5X5 522 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 HCFC2Q9Y5Z7 792 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 TRBV23OR9-2A0A075B6M9 112 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 A0A1B0GTH9 108 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 LRIT2A6NDA9 550 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 ZNF98A6NK75 572 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 OR52A4PA6NMU1 304 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 H7C2Y5 167 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 AIPO00170 330 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 RAD1O60671 282 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 GLAP06280 429 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 C6P13671 934 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 F3P13726 295 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 IFNGR1P15260 489 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 RPS27P42677 84 aaKnown RBP9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 BTN3A2P78410 334 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 DYRK1AQ13627 763 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 CBFBQ13951 182 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 LCTLQ6UWM7 567 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 ZCCHC10Q8TBK6 192 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 GAL3ST3Q96A11 431 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 S100A16Q96FQ6 103 aaKnown RBP9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 TRMT2BQ96GJ1 504 aaKnown RBP9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 SEC22AQ96IW7 307 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 PTCHD1Q96NR3 888 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 KCNK15Q9H427 330 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 CLDND1Q9NY35 253 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 ABRACLQ9P1F3 81 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 MYEF2Q9P2K5 600 aaKnown RBP9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 ZNF230Q9UIE0 474 aaPredicted RBP9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 ING1Q9UK53 422 aaPredicted RBP9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 ZNF443Q9Y2A4 671 aaPredicted RBP9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 ZNF780BQ9Y6R6 833 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 A0A1B0GUH1 482 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 A8MXK9 166 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 FAM25EA8MYX2 175 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 DNASE2O00115 360 aaPredicted RBP9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 GPR31O00270 319 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 SELENOFO60613 162 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 TGM6O95932 706 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 SRMP19623 302 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 RAB3AP20336 220 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 ACADLP28330 430 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 RPL4P36578 427 aaKnown RBP9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 CSNK1G2P78368 415 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 MESP2Q0VG99 397 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 BAMBIQ13145 260 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 TPGS2Q68CL5 300 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 ZNF660Q6AZW8 331 aaPredicted RBP9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 DMKNQ6E0U4 476 aaPredicted RBP9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 SEZ6L2Q6UXD5 910 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 ZNF836Q6ZNA1 936 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 DCUN1D3Q8IWE4 304 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 CLRN3Q8NCR9 226 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 ATOH1Q92858 354 aaPredicted RBP9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 SHDQ96IW2 340 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 SPACA7Q96KW9 195 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 C19orf43Q9BQ61 176 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 FBXL3Q9UKT7 428 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 PLCL2Q9UPR0 1127 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 KCNK6Q9Y257 313 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 ADAM18Q9Y3Q7 739 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 ZNF175Q9Y473 711 aa9.09□□□□□ -0.96
PTCHD4-202ENST00000398738 SPEGQ15772 3267 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 HEATR5BQ9P2D3 2071 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 J3QRE1 110 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 BHLHE40O14503 412 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 EMC8O43402 210 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 LATS1O95835 1130 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 GIPP09681 153 aaPredicted RBP9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 PPP3CBP16298 524 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 ZNF3P17036 446 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 P2RX1P51575 399 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 ART1P52961 327 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 SIRPAP78324 504 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 SHC2P98077 582 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 CAP1Q01518 475 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 GAS6Q14393 721 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 OR1Q1Q15612 314 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 PDSS1Q5T2R2 415 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 LIN54Q6MZP7 749 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 TMPRSS12Q86WS5 348 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 LINC01555Q8NAE3 123 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 KCT2Q8NC54 265 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 BPIFCQ8NFQ6 507 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 SLC25A38Q96DW6 304 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 DTD2Q96FN9 168 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 ARHGDIGQ99819 225 aa9.08□□□□□ -0.96
PTCHD4-202ENST00000398738 SLC6A15Q9H2J7 730 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms