RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 PTGS2P35354 604 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 NKAIN1Q4KMZ8 207 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 TMEM246Q9BRR3 403 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 TAS2R8Q9NYW2 309 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 M0R1B8 84 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 SLC22A25Q6T423 547 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 UBALD2Q8IYN6 164 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 CCDC74BQ96LY2 380 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 FAIMQ9NVQ4 179 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 HHLA2Q9UM44 414 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 REEP5Q00765 189 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 TMEM163Q8TC26 289 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 LHX6Q9UPM6 363 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 VEZF1Q14119 521 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 BCL2A1Q16548 175 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 BORAQ6PGQ7 559 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 OR1J2Q8NGS2 313 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 SMIM3Q9BZL3 60 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 TINAGL1Q9GZM7 467 aaPredicted RBP10.53□□□□□ -0.72
TTC28-201ENST00000397906 A0A1B0GUL6 1792 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 SEC14L2O76054 403 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 PROX2Q3B8N5 592 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 Q6ZS52 159 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 KCTD20Q7Z5Y7 419 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 KDM8Q8N371 416 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 SLC38A5Q8WUX1 472 aa10.53□□□□□ -0.72
TTC28-201ENST00000397906 SLC1A3P43003 542 aa10.52□□□□□ -0.72
TTC28-201ENST00000397906 MTCP1P56278 107 aa10.52□□□□□ -0.72
TTC28-201ENST00000397906 PPIAP62937 165 aaKnown RBP10.52□□□□□ -0.72
TTC28-201ENST00000397906 EHFQ9NZC4 300 aa10.52□□□□□ -0.72
TTC28-201ENST00000397906 STEAP1Q9UHE8 339 aa10.52□□□□□ -0.72
TTC28-201ENST00000397906 MAST2Q6P0Q8 1798 aa10.52□□□□□ -0.72
TTC28-201ENST00000397906 NFYBP25208 207 aa10.52□□□□□ -0.72
TTC28-201ENST00000397906 OR2T11Q8NH01 316 aa10.52□□□□□ -0.72
TTC28-201ENST00000397906 TAAR8Q969N4 342 aa10.52□□□□□ -0.72
TTC28-201ENST00000397906 TNFRSF13CQ96RJ3 184 aa10.52□□□□□ -0.72
TTC28-201ENST00000397906 R4GN57 208 aa10.52□□□□□ -0.72
TTC28-201ENST00000397906 MEGF11A6BM72 1044 aa10.52□□□□□ -0.72
TTC28-201ENST00000397906 LRRC30A6NM36 301 aa10.52□□□□□ -0.72
TTC28-201ENST00000397906 HPGDSO60760 199 aa10.52□□□□□ -0.72
TTC28-201ENST00000397906 HMGA1P17096 107 aaKnown RBP10.52□□□□□ -0.72
TTC28-201ENST00000397906 TRILQ7L0X0 811 aa10.52□□□□□ -0.72
TTC28-201ENST00000397906 WFDC8Q8IUA0 241 aa10.52□□□□□ -0.72
TTC28-201ENST00000397906 MSI2Q96DH6 328 aaKnown RBP10.52□□□□□ -0.72
TTC28-201ENST00000397906 DPCDQ9BVM2 203 aaPredicted RBP10.52□□□□□ -0.72
TTC28-201ENST00000397906 GPR45Q9Y5Y3 372 aa10.52□□□□□ -0.72
TTC28-201ENST00000397906 UBFD1O14562 309 aaKnown RBP10.52□□□□□ -0.73
TTC28-201ENST00000397906 TFF2Q03403 129 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 PGGHGQ32M88 737 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 TMEM52BQ4KMG9 183 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 ZNF578Q96N58 590 aaPredicted RBP10.52□□□□□ -0.73
TTC28-201ENST00000397906 ATG4BQ9Y4P1 393 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 NME7Q9Y5B8 376 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 AKR7A3O95154 331 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 PAHP00439 452 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 GABARAPL2P60520 117 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 SYT13Q7L8C5 426 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 NMNAT3Q96T66 252 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 TMEM100Q9NV29 134 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 GFOD1Q9NXC2 390 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 TMEM181Q9P2C4 612 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 GHRLQ9UBU3 117 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 TIAM2Q8IVF5 1701 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 DNASE1P24855 282 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 WBP2Q969T9 261 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 ATOH8Q96SQ7 321 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 MED18Q9BUE0 208 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 KIR3DX1Q9H7L2 352 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 NDUFAF4Q9P032 175 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 EMCNQ9ULC0 261 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 OR51B4Q9Y5P0 310 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 SOCS6O14544 535 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 PRKNO60260 465 aaPredicted RBP10.52□□□□□ -0.73
TTC28-201ENST00000397906 GNB2P62879 340 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 DUSP2Q05923 314 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 USF2Q15853 346 aaPredicted RBP10.52□□□□□ -0.73
TTC28-201ENST00000397906 AADACL3Q5VUY0 350 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 PM20D2Q8IYS1 436 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 TMEM255BQ8WV15 326 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 APH1AQ96BI3 265 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 C1orf198Q9H425 327 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 ECM29Q5VYK3 1845 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 KLK10O43240 276 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 OR8G3PP0DMU2 310 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 GAAP10253 952 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 CDK5R2Q13319 367 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 GLYR1Q49A26 553 aaPredicted RBP10.52□□□□□ -0.73
TTC28-201ENST00000397906 TMEM9Q9P0T7 183 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 HSPE1-MOB4S4R3N1 261 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 NKX6-3A6NJ46 265 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 SNAPC5O75971 98 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 AGAP6Q5VW22 663 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 CNIH2Q6PI25 160 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 Q7L0L9 218 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 MISPQ8IVT2 679 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 ZNF420Q8TAQ5 688 aaPredicted RBP10.52□□□□□ -0.73
TTC28-201ENST00000397906 CMSS1Q9BQ75 279 aaKnown RBP10.52□□□□□ -0.73
TTC28-201ENST00000397906 PIGBOS1A0A0B4J2F0 54 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 DEFA4P12838 97 aa10.52□□□□□ -0.73
TTC28-201ENST00000397906 NDUFB7P17568 137 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms