RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 BEND4Q6ZU67 534 aa22.57■■□□□ 1.2
TSPAN4-207ENST00000397411 FKBP9P1Q75LS8 142 aa22.57■■□□□ 1.2
TSPAN4-207ENST00000397411 P3H2Q8IVL5 708 aa22.57■■□□□ 1.2
TSPAN4-207ENST00000397411 ZNF100Q8IYN0 542 aa22.57■■□□□ 1.2
TSPAN4-207ENST00000397411 C10orf53Q8N6V4 93 aa22.57■■□□□ 1.2
TSPAN4-207ENST00000397411 TMEM99Q8N816 258 aa22.57■■□□□ 1.2
TSPAN4-207ENST00000397411 MFSD8Q8NHS3 518 aa22.57■■□□□ 1.2
TSPAN4-207ENST00000397411 ADAMTS16Q8TE57 1224 aa22.57■■□□□ 1.2
TSPAN4-207ENST00000397411 KTI12Q96EK9 354 aaPredicted RBP22.57■■□□□ 1.2
TSPAN4-207ENST00000397411 EGFL7Q9UHF1 273 aa22.57■■□□□ 1.2
TSPAN4-207ENST00000397411 NOSIPQ9Y314 301 aaKnown RBP22.57■■□□□ 1.2
TSPAN4-207ENST00000397411 CACNA1DQ01668 2161 aa22.56■■□□□ 1.2
TSPAN4-207ENST00000397411 TRAV36DV7A0A075B6V5 113 aa22.56■■□□□ 1.2
TSPAN4-207ENST00000397411 SERPINA1P01009 418 aa22.56■■□□□ 1.2
TSPAN4-207ENST00000397411 IFNA8P32881 189 aa22.56■■□□□ 1.2
TSPAN4-207ENST00000397411 SORDQ00796 357 aa22.56■■□□□ 1.2
TSPAN4-207ENST00000397411 ABLIM2Q6H8Q1 611 aa22.56■■□□□ 1.2
TSPAN4-207ENST00000397411 TTC33Q6PID6 262 aaPredicted RBP22.56■■□□□ 1.2
TSPAN4-207ENST00000397411 ACBD4Q8NC06 268 aa22.56■■□□□ 1.2
TSPAN4-207ENST00000397411 KLHL4Q9C0H6 718 aa22.56■■□□□ 1.2
TSPAN4-207ENST00000397411 KCNN3Q9UGI6 736 aa22.56■■□□□ 1.2
TSPAN4-207ENST00000397411 NDRG3Q9UGV2 375 aa22.56■■□□□ 1.2
TSPAN4-207ENST00000397411 SLC7A7Q9UM01 511 aa22.56■■□□□ 1.2
TSPAN4-207ENST00000397411 CHP2O43745 196 aa22.55■■□□□ 1.2
TSPAN4-207ENST00000397411 NPIPB7O75200 414 aa22.55■■□□□ 1.2
TSPAN4-207ENST00000397411 GGT1P19440 569 aa22.55■■□□□ 1.2
TSPAN4-207ENST00000397411 CALB2P22676 271 aa22.55■■□□□ 1.2
TSPAN4-207ENST00000397411 H3F3AP84243 136 aa22.55■■□□□ 1.2
TSPAN4-207ENST00000397411 EGR4Q05215 589 aa22.55■■□□□ 1.2
TSPAN4-207ENST00000397411 FOXD4Q12950 439 aaPredicted RBP22.55■■□□□ 1.2
TSPAN4-207ENST00000397411 GDF7Q7Z4P5 450 aa22.55■■□□□ 1.2
TSPAN4-207ENST00000397411 GPAT4Q86UL3 456 aa22.55■■□□□ 1.2
TSPAN4-207ENST00000397411 LINC01560Q8TB33 94 aa22.55■■□□□ 1.2
TSPAN4-207ENST00000397411 TAAR8Q969N4 342 aa22.55■■□□□ 1.2
TSPAN4-207ENST00000397411 RPS6KA6Q9UK32 745 aa22.55■■□□□ 1.2
TSPAN4-207ENST00000397411 ZNF814B7Z6K7 855 aa22.54■■□□□ 1.2
TSPAN4-207ENST00000397411 C16orf97H3BN30 126 aa22.54■■□□□ 1.2
TSPAN4-207ENST00000397411 PTNP21246 168 aa22.54■■□□□ 1.2
TSPAN4-207ENST00000397411 CBLP22681 906 aa22.54■■□□□ 1.2
TSPAN4-207ENST00000397411 FAM69AQ5T7M9 428 aa22.54■■□□□ 1.2
TSPAN4-207ENST00000397411 CBLL1Q75N03 491 aa22.54■■□□□ 1.2
TSPAN4-207ENST00000397411 SLC41A3Q96GZ6 507 aa22.54■■□□□ 1.2
TSPAN4-207ENST00000397411 PCDHAC1Q9H158 963 aa22.54■■□□□ 1.2
TSPAN4-207ENST00000397411 ING1Q9UK53 422 aaPredicted RBP22.54■■□□□ 1.2
TSPAN4-207ENST00000397411 IGKV3D-15A0A087WSY6 115 aa22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 AQP7P3A6NL99 342 aa22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 ZNF716A6NP11 495 aa22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 CASKO14936 926 aa22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 RAMP1O60894 148 aa22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 MRPL33O75394 65 aaKnown RBP22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 SSTR2P30874 369 aa22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 IL1RL1Q01638 556 aa22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 MFSD13AQ14CX5 517 aa22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 IFI44LQ53G44 452 aa22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 TRPM8Q7Z2W7 1104 aa22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 VTCN1Q7Z7D3 282 aa22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 FAM156AQ8NDB6 213 aa22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 FAM222BQ8WU58 562 aa22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 MPP4Q96JB8 637 aa22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 TMEM43Q9BTV4 400 aa22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 POLR2J2Q9GZM3 115 aaKnown RBP22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 POLR2J3Q9H1A7 115 aaKnown RBP22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 PARPBPQ9NWS1 579 aa22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 CRIM1Q9NZV1 1036 aa22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 RIMS3Q9UJD0 308 aa22.53■■□□□ 1.2
TSPAN4-207ENST00000397411 IGKV1D-42A0A075B6H8 117 aa22.52■■□□□ 1.2
TSPAN4-207ENST00000397411 VAMP5O95183 116 aa22.52■■□□□ 1.2
TSPAN4-207ENST00000397411 IFNW1P05000 195 aa22.52■■□□□ 1.2
TSPAN4-207ENST00000397411 SLC16A1P53985 500 aa22.52■■□□□ 1.2
TSPAN4-207ENST00000397411 TFAP2EQ6VUC0 442 aa22.52■■□□□ 1.2
TSPAN4-207ENST00000397411 UBE2J2Q8N2K1 259 aa22.52■■□□□ 1.2
TSPAN4-207ENST00000397411 PTDSS2Q9BVG9 487 aa22.52■■□□□ 1.2
TSPAN4-207ENST00000397411 SF3B5Q9BWJ5 86 aaKnown RBP22.52■■□□□ 1.2
TSPAN4-207ENST00000397411 ASPNQ9BXN1 380 aa22.52■■□□□ 1.2
TSPAN4-207ENST00000397411 RASD1Q9Y272 281 aa22.52■■□□□ 1.2
TSPAN4-207ENST00000397411 OR5F1O95221 314 aa22.51■■□□□ 1.19
TSPAN4-207ENST00000397411 HSD17B1P14061 328 aa22.51■■□□□ 1.19
TSPAN4-207ENST00000397411 MSX2P35548 267 aaPredicted RBP22.51■■□□□ 1.19
TSPAN4-207ENST00000397411 UGT2B10P36537 528 aa22.51■■□□□ 1.19
TSPAN4-207ENST00000397411 OR3A2P47893 321 aa22.51■■□□□ 1.19
TSPAN4-207ENST00000397411 PCYT1AP49585 367 aa22.51■■□□□ 1.19
TSPAN4-207ENST00000397411 TLE4Q04727 773 aa22.51■■□□□ 1.19
TSPAN4-207ENST00000397411 PIN1Q13526 163 aaPredicted RBP22.51■■□□□ 1.19
TSPAN4-207ENST00000397411 SLC17A1Q14916 467 aa22.51■■□□□ 1.19
TSPAN4-207ENST00000397411 ZC3HAV1Q7Z2W4 902 aaKnown RBP22.51■■□□□ 1.19
TSPAN4-207ENST00000397411 ZNF295-AS1Q8N0V1 137 aa22.51■■□□□ 1.19
TSPAN4-207ENST00000397411 RBM15BQ8NDT2 890 aaKnown RBP22.51■■□□□ 1.19
TSPAN4-207ENST00000397411 OR9K2Q8NGE7 335 aa22.51■■□□□ 1.19
TSPAN4-207ENST00000397411 GEMIN6Q8WXD5 167 aaKnown RBP22.51■■□□□ 1.19
TSPAN4-207ENST00000397411 APH1AQ96BI3 265 aa22.51■■□□□ 1.19
TSPAN4-207ENST00000397411 HSH2DQ96JZ2 352 aa22.51■■□□□ 1.19
TSPAN4-207ENST00000397411 MAGEL2Q9UJ55 1249 aa22.51■■□□□ 1.19
TSPAN4-207ENST00000397411 SETXQ7Z333 2677 aaKnown RBP22.51■■□□□ 1.19
TSPAN4-207ENST00000397411 EPXP11678 715 aa22.5■■□□□ 1.19
TSPAN4-207ENST00000397411 NQO1P15559 274 aaKnown RBP22.5■■□□□ 1.19
TSPAN4-207ENST00000397411 GRPRP30550 384 aa22.5■■□□□ 1.19
TSPAN4-207ENST00000397411 YAP1P46937 504 aaKnown RBP22.5■■□□□ 1.19
TSPAN4-207ENST00000397411 C1DQ13901 141 aaKnown RBP22.5■■□□□ 1.19
TSPAN4-207ENST00000397411 SPATS1Q496A3 300 aa22.5■■□□□ 1.19
TSPAN4-207ENST00000397411 ANKRD34AQ69YU3 496 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms