RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 H3F3AP84243 136 aa18.86■□□□□ 0.61
TSPAN4-206ENST00000397408 FXNQ16595 210 aa18.86■□□□□ 0.61
TSPAN4-206ENST00000397408 OTUD3Q5T2D3 398 aaPredicted RBP18.86■□□□□ 0.61
TSPAN4-206ENST00000397408 GEMIN6Q8WXD5 167 aaKnown RBP18.86■□□□□ 0.61
TSPAN4-206ENST00000397408 ENKD1Q9H0I2 346 aa18.86■□□□□ 0.61
TSPAN4-206ENST00000397408 MAGEL2Q9UJ55 1249 aa18.86■□□□□ 0.61
TSPAN4-206ENST00000397408 FOXD3Q9UJU5 478 aaPredicted RBP18.86■□□□□ 0.61
TSPAN4-206ENST00000397408 RPS6KA6Q9UK32 745 aa18.86■□□□□ 0.61
TSPAN4-206ENST00000397408 UNC79Q9P2D8 2635 aa18.85■□□□□ 0.61
TSPAN4-206ENST00000397408 ZNF716A6NP11 495 aa18.85■□□□□ 0.61
TSPAN4-206ENST00000397408 LYPD3O95274 346 aa18.85■□□□□ 0.61
TSPAN4-206ENST00000397408 SPATS1Q496A3 300 aa18.85■□□□□ 0.61
TSPAN4-206ENST00000397408 IFI44LQ53G44 452 aa18.85■□□□□ 0.61
TSPAN4-206ENST00000397408 WDR88Q6ZMY6 472 aa18.85■□□□□ 0.61
TSPAN4-206ENST00000397408 FKBP9P1Q75LS8 142 aa18.85■□□□□ 0.61
TSPAN4-206ENST00000397408 NUFIP2Q7Z417 695 aaKnown RBP18.85■□□□□ 0.61
TSPAN4-206ENST00000397408 TMEM99Q8N816 258 aa18.85■□□□□ 0.61
TSPAN4-206ENST00000397408 ZNF610Q8N9Z0 462 aa18.85■□□□□ 0.61
TSPAN4-206ENST00000397408 ACBD4Q8NC06 268 aa18.85■□□□□ 0.61
TSPAN4-206ENST00000397408 MFSD8Q8NHS3 518 aa18.85■□□□□ 0.61
TSPAN4-206ENST00000397408 SLC25A36Q96CQ1 311 aa18.85■□□□□ 0.61
TSPAN4-206ENST00000397408 SLC41A3Q96GZ6 507 aa18.85■□□□□ 0.61
TSPAN4-206ENST00000397408 EPYCQ99645 322 aa18.85■□□□□ 0.61
TSPAN4-206ENST00000397408 TMEM43Q9BTV4 400 aa18.85■□□□□ 0.61
TSPAN4-206ENST00000397408 EMC3Q9P0I2 261 aa18.85■□□□□ 0.61
TSPAN4-206ENST00000397408 CENPEQ02224 2701 aa18.85■□□□□ 0.61
TSPAN4-206ENST00000397408 TRAV36DV7A0A075B6V5 113 aa18.84■□□□□ 0.61
TSPAN4-206ENST00000397408 ZNF724A8MTY0 619 aa18.84■□□□□ 0.61
TSPAN4-206ENST00000397408 FTCDNL1E5RQL4 147 aa18.84■□□□□ 0.61
TSPAN4-206ENST00000397408 IFNW1P05000 195 aa18.84■□□□□ 0.61
TSPAN4-206ENST00000397408 GTF2E2P29084 291 aaKnown RBP18.84■□□□□ 0.61
TSPAN4-206ENST00000397408 PIN1Q13526 163 aaPredicted RBP18.84■□□□□ 0.61
TSPAN4-206ENST00000397408 SNTB1Q13884 538 aaKnown RBP18.84■□□□□ 0.61
TSPAN4-206ENST00000397408 PDK3Q15120 406 aa18.84■□□□□ 0.61
TSPAN4-206ENST00000397408 FAM69AQ5T7M9 428 aa18.84■□□□□ 0.61
TSPAN4-206ENST00000397408 CRYBG3Q68DQ2 2970 aa18.84■□□□□ 0.61
TSPAN4-206ENST00000397408 ZNF474Q6S9Z5 364 aaPredicted RBP18.84■□□□□ 0.61
TSPAN4-206ENST00000397408 GDF7Q7Z4P5 450 aa18.84■□□□□ 0.61
TSPAN4-206ENST00000397408 TAAR8Q969N4 342 aa18.84■□□□□ 0.61
TSPAN4-206ENST00000397408 ZNF775Q96BV0 537 aaPredicted RBP18.84■□□□□ 0.61
TSPAN4-206ENST00000397408 SPOCK3Q9BQ16 436 aa18.84■□□□□ 0.61
TSPAN4-206ENST00000397408 POLR2J2Q9GZM3 115 aaKnown RBP18.84■□□□□ 0.61
TSPAN4-206ENST00000397408 POLR2J3Q9H1A7 115 aaKnown RBP18.84■□□□□ 0.61
TSPAN4-206ENST00000397408 PLSCR4Q9NRQ2 329 aa18.84■□□□□ 0.61
TSPAN4-206ENST00000397408 SNX13Q9Y5W8 968 aa18.84■□□□□ 0.61
TSPAN4-206ENST00000397408 IGKV3D-15A0A087WSY6 115 aa18.83■□□□□ 0.61
TSPAN4-206ENST00000397408 AQP7P3A6NL99 342 aa18.83■□□□□ 0.61
TSPAN4-206ENST00000397408 ARPC2O15144 300 aa18.83■□□□□ 0.61
TSPAN4-206ENST00000397408 OR2T1O43869 369 aa18.83■□□□□ 0.61
TSPAN4-206ENST00000397408 OR5F1O95221 314 aa18.83■□□□□ 0.61
TSPAN4-206ENST00000397408 SLC16A1P53985 500 aa18.83■□□□□ 0.61
TSPAN4-206ENST00000397408 EXOC3L2Q2M3D2 409 aa18.83■□□□□ 0.61
TSPAN4-206ENST00000397408 LINC00114Q6XXX2 140 aa18.83■□□□□ 0.61
TSPAN4-206ENST00000397408 DMRTC2Q8IXT2 367 aaPredicted RBP18.83■□□□□ 0.61
TSPAN4-206ENST00000397408 MPP4Q96JB8 637 aa18.83■□□□□ 0.61
TSPAN4-206ENST00000397408 GORASP2Q9H8Y8 452 aa18.83■□□□□ 0.61
TSPAN4-206ENST00000397408 DCAF13Q9NV06 445 aaKnown RBP18.83■□□□□ 0.61
TSPAN4-206ENST00000397408 C6orf203Q9P0P8 240 aaPredicted RBP18.83■□□□□ 0.61
TSPAN4-206ENST00000397408 SAMD4AQ9UPU9 718 aaKnown RBP18.83■□□□□ 0.61
TSPAN4-206ENST00000397408 HNRNPRO43390 633 aaKnown RBP18.83■□□□□ 0.6
TSPAN4-206ENST00000397408 TTC33Q6PID6 262 aaPredicted RBP18.83■□□□□ 0.6
TSPAN4-206ENST00000397408 TFAP2EQ6VUC0 442 aa18.83■□□□□ 0.6
TSPAN4-206ENST00000397408 GALNT5Q7Z7M9 940 aa18.83■□□□□ 0.6
TSPAN4-206ENST00000397408 STK32CQ86UX6 486 aa18.83■□□□□ 0.6
TSPAN4-206ENST00000397408 KIF18BQ86Y91 864 aa18.83■□□□□ 0.6
TSPAN4-206ENST00000397408 ARHGAP24Q8N264 748 aa18.83■□□□□ 0.6
TSPAN4-206ENST00000397408 MARVELD3Q96A59 401 aa18.83■□□□□ 0.6
TSPAN4-206ENST00000397408 PRRC1Q96M27 445 aa18.83■□□□□ 0.6
TSPAN4-206ENST00000397408 NSMCE2Q96MF7 247 aa18.83■□□□□ 0.6
TSPAN4-206ENST00000397408 AMBRA1Q9C0C7 1298 aa18.83■□□□□ 0.6
TSPAN4-206ENST00000397408 C1orf21Q9H246 121 aa18.83■□□□□ 0.6
TSPAN4-206ENST00000397408 TAS2R1Q9NYW7 299 aa18.83■□□□□ 0.6
TSPAN4-206ENST00000397408 RIMS3Q9UJD0 308 aa18.83■□□□□ 0.6
TSPAN4-206ENST00000397408 V9GYQ6 96 aa18.83■□□□□ 0.6
TSPAN4-206ENST00000397408 NBPF19A0A087WUL8 3843 aa18.82■□□□□ 0.6
TSPAN4-206ENST00000397408 GPR171O14626 319 aa18.82■□□□□ 0.6
TSPAN4-206ENST00000397408 PDE5AO76074 875 aa18.82■□□□□ 0.6
TSPAN4-206ENST00000397408 CBLP22681 906 aa18.82■□□□□ 0.6
TSPAN4-206ENST00000397408 YAP1P46937 504 aaKnown RBP18.82■□□□□ 0.6
TSPAN4-206ENST00000397408 P2RY4P51582 365 aa18.82■□□□□ 0.6
TSPAN4-206ENST00000397408 SORDQ00796 357 aa18.82■□□□□ 0.6
TSPAN4-206ENST00000397408 SLC17A1Q14916 467 aa18.82■□□□□ 0.6
TSPAN4-206ENST00000397408 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.82■□□□□ 0.6
TSPAN4-206ENST00000397408 GPAT4Q86UL3 456 aa18.82■□□□□ 0.6
TSPAN4-206ENST00000397408 C10orf53Q8N6V4 93 aa18.82■□□□□ 0.6
TSPAN4-206ENST00000397408 FAM86B1Q8N7N1 296 aa18.82■□□□□ 0.6
TSPAN4-206ENST00000397408 OR6S1Q8NH40 331 aa18.82■□□□□ 0.6
TSPAN4-206ENST00000397408 PRSS27Q9BQR3 290 aa18.82■□□□□ 0.6
TSPAN4-206ENST00000397408 ZNF426Q9BUY5 554 aa18.82■□□□□ 0.6
TSPAN4-206ENST00000397408 SEC14L4Q9UDX3 406 aa18.82■□□□□ 0.6
TSPAN4-206ENST00000397408 PRPF19Q9UMS4 504 aaKnown RBP18.82■□□□□ 0.6
TSPAN4-206ENST00000397408 A4GNTQ9UNA3 340 aa18.82■□□□□ 0.6
TSPAN4-206ENST00000397408 FREM1Q5H8C1 2179 aa18.81■□□□□ 0.6
TSPAN4-206ENST00000397408 M0R082 166 aa18.81■□□□□ 0.6
TSPAN4-206ENST00000397408 KPNA4O00629 521 aaPredicted RBP18.81■□□□□ 0.6
TSPAN4-206ENST00000397408 FZD7O75084 574 aa18.81■□□□□ 0.6
TSPAN4-206ENST00000397408 BGLAPP02818 100 aa18.81■□□□□ 0.6
TSPAN4-206ENST00000397408 POU2F1P14859 743 aa18.81■□□□□ 0.6
TSPAN4-206ENST00000397408 GRPRP30550 384 aa18.81■□□□□ 0.6
TSPAN4-206ENST00000397408 CD79BP40259 229 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms