RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 CASP12Q6UXS9 341 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 ABHD12BQ7Z5M8 362 aaPredicted RBP7.64□□□□□ -1.19
CAPN3-208ENST00000397204 CMIPQ8IY22 773 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 C4orf33Q8N1A6 199 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 ARFGAP2Q8N6H7 521 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 POMGNT2Q8NAT1 580 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 OR8J2Q8NGG1 315 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 TMEM45BQ96B21 275 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 TUBGCP3Q96CW5 907 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 DDIT4LQ96D03 193 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 ZG16BQ96DA0 208 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 SLC35G5Q96KT7 338 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 C3orf30Q96M34 536 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 C1orf50Q9BV19 199 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 SF3B5Q9BWJ5 86 aaKnown RBP7.64□□□□□ -1.19
CAPN3-208ENST00000397204 OR11A1Q9GZK7 315 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 OR51I1Q9H343 314 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 SERHL2Q9H4I8 314 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 TMEM45AQ9NWC5 275 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 GIMAP2Q9UG22 337 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 MOKQ9UQ07 419 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 ARFGEF3Q5TH69 2177 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 A0A096LPE4 126 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 TMED7-TICAM2A0A0A6YYA0 188 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 A0A1W2PPZ6 126 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 VSTM5A8MXK1 200 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 ATP6V1G2-DDX39BF2Z307 99 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 FAAHO00519 579 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 KIAA0513O60268 411 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 PDE5AO76074 875 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 LY6HO94772 140 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 CRYAAP02489 173 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 SHBGP04278 402 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 OR12D1P0DN82 309 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 G6PDP11413 515 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 UQCRC2P22695 453 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 SOAT1P35610 550 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 SLC1A3P43003 542 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 POLR2HP52434 150 aaKnown RBP7.63□□□□□ -1.19
CAPN3-208ENST00000397204 SNRPD2P62316 118 aaKnown RBP7.63□□□□□ -1.19
CAPN3-208ENST00000397204 SLC25A3Q00325 362 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 GSTA3Q16772 222 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 IQCCQ4KMZ1 466 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 ANXA8L1Q5VT79 327 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 C9orf135Q5VTT2 229 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 OR4F3Q6IEY1 312 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 ANKRD16Q6P6B7 361 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 PAQR6Q6TCH4 344 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 OLIG3Q7RTU3 272 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 CLEC4FQ8N1N0 589 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 RFLNBQ8N5W9 214 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 ZIC4Q8N9L1 334 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 VPS37AQ8NEZ2 397 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 ROPN1LQ96C74 230 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 DMRTB1Q96MA1 342 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 ZIM3Q96PE6 472 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 ZNF317Q96PQ6 595 aaPredicted RBP7.63□□□□□ -1.19
CAPN3-208ENST00000397204 KCNS3Q9BQ31 491 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 RAB1BQ9H0U4 201 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 MTHFD2LQ9H903 347 aaPredicted RBP7.63□□□□□ -1.19
CAPN3-208ENST00000397204 CHODLQ9H9P2 273 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 MOV10Q9HCE1 1003 aaKnown RBP7.63□□□□□ -1.19
CAPN3-208ENST00000397204 MKS1Q9NXB0 559 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 ASIC5Q9NY37 505 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 ZDHHC2Q9UIJ5 367 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 OSGIN1Q9UJX0 560 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 TMED7Q9Y3B3 224 aa7.63□□□□□ -1.19
CAPN3-208ENST00000397204 IGHV4-61A0A0C4DH41 118 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 RNF103-CHMP3A0A140T963 221 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 OR6C65A6NJZ3 312 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 SMIM23A6NLE4 172 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 SCN2BO60939 215 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 BCAS1O75363 584 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-208ENST00000397204 VAMP5O95183 116 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 GPIP06744 558 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 IMPDH2P12268 514 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 CCNA2P20248 432 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 IDH3GP51553 393 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-208ENST00000397204 GNA13Q14344 377 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 EFNB3Q15768 340 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 CARTPTQ16568 116 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 C3orf36Q3SXR2 165 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 TMEM225Q6GV28 225 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 UGT2A3Q6UWM9 527 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 FRRS1Q6ZNA5 592 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 AAED1Q7RTV5 226 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 SLC46A3Q7Z3Q1 461 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 CLECL1Q8IZS7 167 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 Q8N3U1 123 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 FAM169BQ8N8A8 192 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 OR4F15Q8NGB8 312 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 OR4A15Q8NGL6 344 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 AGR3Q8TD06 166 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 UBLCP1Q8WVY7 318 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-208ENST00000397204 CNOT9Q92600 299 aaKnown RBP7.62□□□□□ -1.19
CAPN3-208ENST00000397204 RAB8BQ92930 207 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 C3orf49Q96BT1 292 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 NEURL3Q96EH8 262 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 DNAJA3Q96EY1 480 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 SORCS2Q96PQ0 1159 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms