RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 PRAMEF27A3QJZ7 478 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 C1orf196B1AJZ1 125 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 C17orf112F2Z3M2 114 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 GAPDHSO14556 408 aaPredicted RBP6.7□□□□□ -1.34
UPF2-203ENST00000397053 POU2F2P09086 479 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 PRDX3P30048 256 aaKnown RBP6.7□□□□□ -1.34
UPF2-203ENST00000397053 SELENOWP63302 87 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 CEACAM7Q14002 265 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 FAM74A1Q5RGS3 127 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 PRAMEF9Q5VWM5 478 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 ANKRD54Q6NXT1 300 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 METAP1DQ6UB28 335 aaPredicted RBP6.7□□□□□ -1.34
UPF2-203ENST00000397053 SBSNQ6UWP8 590 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 ISCA2Q86U28 154 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 METTL4Q8N3J2 472 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 FAM109AQ8N4B1 249 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 L3MBTL4Q8NA19 623 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 BHLHE23Q8NDY6 225 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 HSD17B8Q92506 261 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 GTF2H4Q92759 462 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 SLC6A18Q96N87 628 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 MYADMQ96S97 322 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 GLTPQ9NZD2 209 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 PPT2Q9UMR5 302 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 CORINQ9Y5Q5 1042 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 V9GY05 133 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 ALOX12BO75342 701 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 TUSC2O75896 110 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 CDK1P06493 297 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 PROZP22891 400 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 SH3BP2P78314 561 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 GPLD1P80108 840 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 MRPS10P82664 201 aaKnown RBP6.7□□□□□ -1.34
UPF2-203ENST00000397053 NKAIN1Q4KMZ8 207 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 SCD5Q86SK9 330 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 LSMEM2Q8N112 164 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 SLC35G3Q8N808 338 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 C3orf58Q8NDZ4 430 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 OR5D18Q8NGL1 313 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 MAFAQ8NHW3 353 aaPredicted RBP6.7□□□□□ -1.34
UPF2-203ENST00000397053 ZNF420Q8TAQ5 688 aaPredicted RBP6.7□□□□□ -1.34
UPF2-203ENST00000397053 MITD1Q8WV92 249 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 HRASLS5Q96KN8 279 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 PDCD1LG2Q9BQ51 273 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 DEFB127Q9H1M4 99 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 GPATCH2Q9NW75 528 aa6.7□□□□□ -1.34
UPF2-203ENST00000397053 C20orf202A1L168 122 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 NAP1L6A6NFF2 107 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 RNASET2O00584 256 aaKnown RBP6.69□□□□□ -1.34
UPF2-203ENST00000397053 KLK10O43240 276 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 CSN1S1P47710 185 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 SUB1P53999 127 aaKnown RBP eCLIP6.69□□□□□ -1.34
UPF2-203ENST00000397053 GPR85P60893 370 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 SLC10A2Q12908 348 aaPredicted RBP6.69□□□□□ -1.34
UPF2-203ENST00000397053 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.69□□□□□ -1.34
UPF2-203ENST00000397053 WDR5BQ86VZ2 330 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 SKA3Q8IX90 412 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 CISD2Q8N5K1 135 aaKnown RBP6.69□□□□□ -1.34
UPF2-203ENST00000397053 NANPQ8TBE9 248 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 CD200R1Q8TD46 325 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 ANKRD9Q96BM1 317 aaPredicted RBP6.69□□□□□ -1.34
UPF2-203ENST00000397053 LCORQ96JN0 433 aaPredicted RBP6.69□□□□□ -1.34
UPF2-203ENST00000397053 FAM210AQ96ND0 272 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 SORCS2Q96PQ0 1159 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 ZNF300Q96RE9 604 aaPredicted RBP6.69□□□□□ -1.34
UPF2-203ENST00000397053 DHRS9Q9BPW9 319 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 UFSP2Q9NUQ7 469 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 HSPE1-MOB4S4R3N1 261 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 DEPDC5O75140 1603 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 F5H5P2 479 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 ADAM23O75077 832 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 IGHV3-9P01782 118 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 HLA-FP30511 346 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 SERPINF1P36955 418 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 TAS2R46P59540 309 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 ERVFC1P60507 584 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 RAP2BP61225 183 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 HBG1P69891 147 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 HBG2P69892 147 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 MRPS34P82930 218 aaKnown RBP6.69□□□□□ -1.34
UPF2-203ENST00000397053 GAB1Q13480 694 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 CAMK2BQ13554 666 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 MORN1Q5T089 497 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 METTL11BQ5VVY1 283 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 HACD4Q5VWC8 232 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 NKAIN2Q5VXU1 208 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 FAM198BQ6UWH4 519 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 NAA40Q86UY6 237 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 OR56B1Q8NGI3 324 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 KCNE4Q8WWG9 221 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 HHIPL1Q96JK4 782 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 MFFQ9GZY8 342 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 PPA2Q9H2U2 334 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 CLEC1BQ9P126 229 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 PROCRQ9UNN8 238 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 SVILO95425 2214 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 CACNA1CQ13936 2221 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 A0A1W2PQL4 384 aaPredicted RBP6.69□□□□□ -1.34
UPF2-203ENST00000397053 FAM189A1O60320 539 aa6.69□□□□□ -1.34
UPF2-203ENST00000397053 FOXD2O60548 495 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms