RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 DBTP11182 482 aaKnown RBP11.48□□□□□ -0.57
TRIM39-204ENST00000396548 PEPDP12955 493 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 BMP7P18075 431 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 CNR1P21554 472 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 ITGA3P26006 1051 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 SLC6A6P31641 620 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 DSCR4P56555 118 aaPredicted RBP11.48□□□□□ -0.57
TRIM39-204ENST00000396548 PRPS1P60891 318 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 GXYLT1Q4G148 440 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 FAM69AQ5T7M9 428 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 POMZP3Q6PJE2 187 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 GTPBP8Q8N3Z3 284 aaPredicted RBP11.48□□□□□ -0.57
TRIM39-204ENST00000396548 MDS2Q8NDY4 140 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 TMIGD2Q96BF3 282 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 Q96MT0 163 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 NANSQ9NR45 359 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 SEC14L4Q9UDX3 406 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 G3V3Y1 287 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 ARPC3O15145 178 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 PPP1R3DO95685 299 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 TXNDC12O95881 172 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 IMPDH2P12268 514 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 SLC2A5P22732 501 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 B3GALT5-AS1P59052 145 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 EMX1Q04741 257 aaPredicted RBP11.47□□□□□ -0.57
TRIM39-204ENST00000396548 SPINK14Q6IE38 97 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 OR1J4Q8NGS1 313 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 PTP4A1Q93096 173 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 ARL5BQ96KC2 179 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 UBL7Q96S82 380 aaPredicted RBP11.47□□□□□ -0.57
TRIM39-204ENST00000396548 IFT27Q9BW83 186 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 TAPBPLQ9BX59 468 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 POTEKPQ9BYX7 375 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 AMBNQ9NP70 447 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 HINT3Q9NQE9 182 aaKnown RBP11.47□□□□□ -0.57
TRIM39-204ENST00000396548 ARGFXA6NJG6 315 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 CBR3O75828 277 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 DNASE1L1P49184 302 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 PMS2P3Q13401 168 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 GLYR1Q49A26 553 aaPredicted RBP11.47□□□□□ -0.57
TRIM39-204ENST00000396548 ANKK1Q8NFD2 765 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 OR4K17Q8NGC6 315 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 HCAR1Q9BXC0 346 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 PRRG3Q9BZD7 231 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 CCNB1IP1Q9NPC3 277 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 LRFN1Q9P244 771 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 TEKT2Q9UIF3 430 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 MRPS18CQ9Y3D5 142 aaKnown RBP11.47□□□□□ -0.57
TRIM39-204ENST00000396548 MT-ND2P03891 347 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 P04436 131 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 APEHP13798 732 aaKnown RBP11.47□□□□□ -0.57
TRIM39-204ENST00000396548 SDHBP21912 280 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 AQP2P41181 271 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 EIF1P41567 113 aaKnown RBP11.47□□□□□ -0.57
TRIM39-204ENST00000396548 ZNF91Q05481 1191 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 RPL18Q07020 188 aaKnown RBP11.47□□□□□ -0.57
TRIM39-204ENST00000396548 ABHD17BQ5VST6 288 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 RNLSQ5VYX0 342 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 NXNL2Q5VZ03 156 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 BBS1Q8NFJ9 593 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 MFSD8Q8NHS3 518 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 FAR1Q8WVX9 515 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 COPS4Q9BT78 406 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 RNF32Q9H0A6 362 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 ZNF552Q9H707 407 aaPredicted RBP11.47□□□□□ -0.57
TRIM39-204ENST00000396548 PTGES2Q9H7Z7 377 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 FANCFQ9NPI8 374 aa11.47□□□□□ -0.57
TRIM39-204ENST00000396548 J3QRE1 110 aa11.46□□□□□ -0.57
TRIM39-204ENST00000396548 PRODHO43272 600 aa11.46□□□□□ -0.57
TRIM39-204ENST00000396548 RGS10O43665 173 aa11.46□□□□□ -0.57
TRIM39-204ENST00000396548 ZNF17P17021 662 aa11.46□□□□□ -0.57
TRIM39-204ENST00000396548 EEF1B2P24534 225 aaKnown RBP11.46□□□□□ -0.57
TRIM39-204ENST00000396548 RRADP55042 308 aa11.46□□□□□ -0.57
TRIM39-204ENST00000396548 SGCBQ16585 318 aa11.46□□□□□ -0.57
TRIM39-204ENST00000396548 IGFL2Q6UWQ7 119 aa11.46□□□□□ -0.57
TRIM39-204ENST00000396548 NHLRC1Q6VVB1 395 aa11.46□□□□□ -0.57
TRIM39-204ENST00000396548 AHSA2Q719I0 299 aa11.46□□□□□ -0.57
TRIM39-204ENST00000396548 IGFN1Q86VF2 1251 aa11.46□□□□□ -0.57
TRIM39-204ENST00000396548 KISS1RQ969F8 398 aaPredicted RBP11.46□□□□□ -0.57
TRIM39-204ENST00000396548 MUL1Q969V5 352 aa11.46□□□□□ -0.57
TRIM39-204ENST00000396548 CDCA4Q9BXL8 241 aa11.46□□□□□ -0.57
TRIM39-204ENST00000396548 MRPL39Q9NYK5 338 aaKnown RBP11.46□□□□□ -0.57
TRIM39-204ENST00000396548 ADAM18Q9Y3Q7 739 aa11.46□□□□□ -0.57
TRIM39-204ENST00000396548 EFCAB10A6NFE3 127 aa11.46□□□□□ -0.58
TRIM39-204ENST00000396548 PLPP3O14495 311 aa11.46□□□□□ -0.58
TRIM39-204ENST00000396548 IMPA2O14732 288 aa11.46□□□□□ -0.58
TRIM39-204ENST00000396548 IDH3BO43837 385 aa11.46□□□□□ -0.58
TRIM39-204ENST00000396548 SLC25A12O75746 678 aa11.46□□□□□ -0.58
TRIM39-204ENST00000396548 CEACAM4O75871 244 aa11.46□□□□□ -0.58
TRIM39-204ENST00000396548 RFPL3SP0C7P2 107 aa11.46□□□□□ -0.58
TRIM39-204ENST00000396548 C21orf33P30042 268 aaPredicted RBP11.46□□□□□ -0.58
TRIM39-204ENST00000396548 C19orf57Q0VDD7 668 aa11.46□□□□□ -0.58
TRIM39-204ENST00000396548 CDC20Q12834 499 aa11.46□□□□□ -0.58
TRIM39-204ENST00000396548 B3GNT6Q6ZMB0 384 aa11.46□□□□□ -0.58
TRIM39-204ENST00000396548 OR5M1Q8NGP8 315 aa11.46□□□□□ -0.58
TRIM39-204ENST00000396548 DDIT4LQ96D03 193 aa11.46□□□□□ -0.58
TRIM39-204ENST00000396548 UTP23Q9BRU9 249 aaKnown RBP11.46□□□□□ -0.58
TRIM39-204ENST00000396548 RPL36Q9Y3U8 105 aaKnown RBP11.46□□□□□ -0.58
TRIM39-204ENST00000396548 IER3IP1Q9Y5U9 82 aa11.46□□□□□ -0.58
TRIM39-204ENST00000396548 CNOT1A5YKK6 2376 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms