RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 CSPG4Q6UVK1 2322 aa14.38□□□□□ -0.11
DDR1-229ENST00000396342 FN1P02751 2386 aaKnown RBP14.37□□□□□ -0.11
DDR1-229ENST00000396342 A0A0G2JPF8 293 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 AQP7P3A6NL99 342 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 HNRNPCL2B2RXH8 293 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 HNRNPCL3B7ZW38 293 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 UBDO15205 165 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 AKAP8O43823 692 aaKnown RBP14.37□□□□□ -0.11
DDR1-229ENST00000396342 HNRNPCL1O60812 293 aaKnown RBP14.37□□□□□ -0.11
DDR1-229ENST00000396342 NDUFS7O75251 213 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 AKR7A3O95154 331 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 BCHEP06276 602 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 ITGA5P08648 1049 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 VIMP08670 466 aaKnown RBP14.37□□□□□ -0.11
DDR1-229ENST00000396342 HNRNPCL4P0DMR1 293 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 HNF1AP20823 631 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 EDNRAP25101 427 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 H3F3AP84243 136 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 FUT5Q11128 374 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 C1DQ13901 141 aaKnown RBP14.37□□□□□ -0.11
DDR1-229ENST00000396342 CARTPTQ16568 116 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 PDCD4Q53EL6 469 aaKnown RBP14.37□□□□□ -0.11
DDR1-229ENST00000396342 TSPO2Q5TGU0 170 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 CYB5R2Q6BCY4 276 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 SEZ6L2Q6UXD5 910 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 SLC46A3Q7Z3Q1 461 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 ZNF540Q8NDQ6 660 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 MGARPQ8TDB4 240 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 AURKBQ96GD4 344 aaPredicted RBP14.37□□□□□ -0.11
DDR1-229ENST00000396342 ZNF317Q96PQ6 595 aaPredicted RBP14.37□□□□□ -0.11
DDR1-229ENST00000396342 MDFIQ99750 246 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 AMBRA1Q9C0C7 1298 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 SLC13A4Q9UKG4 626 aa14.37□□□□□ -0.11
DDR1-229ENST00000396342 CDHR4A6H8M9 788 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 LIPT2A6NK58 231 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 ELOA3DA6NLF2 546 aaPredicted RBP14.36□□□□□ -0.11
DDR1-229ENST00000396342 SDHDO14521 159 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 BCAS1O75363 584 aaPredicted RBP14.36□□□□□ -0.11
DDR1-229ENST00000396342 ERLIN1O75477 346 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 THBS1P07996 1170 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 IMPDH2P12268 514 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 PDLIM4P50479 330 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 SH3BGRP55822 239 aaPredicted RBP14.36□□□□□ -0.11
DDR1-229ENST00000396342 IRX1P78414 480 aaPredicted RBP14.36□□□□□ -0.11
DDR1-229ENST00000396342 LOXL1Q08397 574 aaPredicted RBP14.36□□□□□ -0.11
DDR1-229ENST00000396342 ELOA3BQ3SY89 546 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 ZNF311Q5JNZ3 666 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 RNF220Q5VTB9 566 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 C1orf140Q5VVS0 124 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 KRT73Q86Y46 540 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 MIER2Q8N344 545 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 TMEM99Q8N816 258 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 ELOA3Q8NG57 546 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 PROX1Q92786 737 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 FBXO17Q96EF6 278 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 PIMREGQ9BSJ6 248 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 C20orf27Q9GZN8 174 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 ADAM19Q9H013 955 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 SHARPINQ9H0F6 387 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 WDR55Q9H6Y2 383 aaPredicted RBP14.36□□□□□ -0.11
DDR1-229ENST00000396342 TPT1P8Q9HAU6 139 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 MYOZ1Q9NP98 299 aaPredicted RBP14.36□□□□□ -0.11
DDR1-229ENST00000396342 ZIM2Q9NZV7 527 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 ZNF443Q9Y2A4 671 aaPredicted RBP14.36□□□□□ -0.11
DDR1-229ENST00000396342 GPR45Q9Y5Y3 372 aa14.36□□□□□ -0.11
DDR1-229ENST00000396342 IGHV4-30-2A0A087WSY4 118 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 TMEM120BA0PK00 339 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 OR2T1O43869 369 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 TFPTP0C1Z6 253 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 GKN3PP0CG01 181 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 ZCCHC18P0CG32 403 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 ZNF43P17038 809 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 RPS4Y1P22090 263 aaKnown RBP14.35□□□□□ -0.11
DDR1-229ENST00000396342 USF1P22415 310 aaPredicted RBP14.35□□□□□ -0.11
DDR1-229ENST00000396342 NCALDP61601 193 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 SPOCK1Q08629 439 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 TMEM249Q2WGJ8 235 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 COX20Q5RI15 118 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 NIPAL3Q6P499 406 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 C5orf46Q6UWT4 87 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 VRK2Q86Y07 508 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 RNF217Q8TC41 542 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 STK35Q8TDR2 534 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 SLC25A36Q96CQ1 311 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 VRK1Q99986 396 aaPredicted RBP14.35□□□□□ -0.11
DDR1-229ENST00000396342 SPATA5L1Q9BVQ7 753 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 SPATA9Q9BWV2 254 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 MANSC1Q9H8J5 431 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 RLIMQ9NVW2 624 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 MOKQ9UQ07 419 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 PCNX3Q9H6A9 2034 aa14.35□□□□□ -0.11
DDR1-229ENST00000396342 ZNF469Q96JG9 3925 aaPredicted RBP14.35□□□□□ -0.11
DDR1-229ENST00000396342 TLN2Q9Y4G6 2542 aa14.34□□□□□ -0.11
DDR1-229ENST00000396342 NDUFS8O00217 210 aa14.34□□□□□ -0.11
DDR1-229ENST00000396342 KLF11O14901 512 aa14.34□□□□□ -0.11
DDR1-229ENST00000396342 SLC43A1O75387 559 aa14.34□□□□□ -0.11
DDR1-229ENST00000396342 F12P00748 615 aaPredicted RBP14.34□□□□□ -0.11
DDR1-229ENST00000396342 ALDOCP09972 364 aaKnown RBP14.34□□□□□ -0.11
DDR1-229ENST00000396342 ETFAP13804 333 aa14.34□□□□□ -0.11
DDR1-229ENST00000396342 HOXB1P14653 301 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms