RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 OR6K3Q8NGY3 331 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 GEMIN6Q8WXD5 167 aaKnown RBP17.72■□□□□ 0.43
SNCA-203ENST00000394986 CLPTM1LQ96KA5 538 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 RBM24Q9BX46 236 aaKnown RBP17.72■□□□□ 0.43
SNCA-203ENST00000394986 PROCRQ9UNN8 238 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 TRAV36DV7A0A075B6V5 113 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 ZNF716A6NP11 495 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 A8MXE2 369 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 LRRN3E7EW58 273 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 J3KTA2 159 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 KPNA4O00629 521 aaPredicted RBP17.72■□□□□ 0.43
SNCA-203ENST00000394986 GMNNO75496 209 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 IFNW1P05000 195 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 YES1P07947 543 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 TMEM201Q5SNT2 666 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 EEF1A1P5Q5VTE0 462 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 ZNF474Q6S9Z5 364 aaPredicted RBP17.72■□□□□ 0.43
SNCA-203ENST00000394986 PAQR6Q6TCH4 344 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 LINC00114Q6XXX2 140 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.72■□□□□ 0.43
SNCA-203ENST00000394986 PIGXQ8TBF5 258 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 RNASE6Q93091 150 aaKnown RBP17.72■□□□□ 0.43
SNCA-203ENST00000394986 PRSS27Q9BQR3 290 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 GORASP2Q9H8Y8 452 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 BCO1Q9HAY6 547 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 DCAF13Q9NV06 445 aaKnown RBP17.72■□□□□ 0.43
SNCA-203ENST00000394986 GALNT8Q9NY28 637 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 RPS6KA6Q9UK32 745 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 INTS1Q8N201 2190 aaKnown RBP17.71■□□□□ 0.43
SNCA-203ENST00000394986 MSTNO14793 375 aa17.71■□□□□ 0.43
SNCA-203ENST00000394986 EIF1BO60739 113 aaKnown RBP17.71■□□□□ 0.43
SNCA-203ENST00000394986 OR5F1O95221 314 aa17.71■□□□□ 0.43
SNCA-203ENST00000394986 CD8BP10966 210 aa17.71■□□□□ 0.43
SNCA-203ENST00000394986 EDNRAP25101 427 aa17.71■□□□□ 0.43
SNCA-203ENST00000394986 P2RY4P51582 365 aa17.71■□□□□ 0.43
SNCA-203ENST00000394986 FBXL19-AS1Q494R0 122 aa17.71■□□□□ 0.43
SNCA-203ENST00000394986 CYP2R1Q6VVX0 501 aa17.71■□□□□ 0.43
SNCA-203ENST00000394986 MEX3BQ6ZN04 569 aaKnown RBP17.71■□□□□ 0.43
SNCA-203ENST00000394986 TSEN54Q7Z6J9 526 aaKnown RBP17.71■□□□□ 0.43
SNCA-203ENST00000394986 NKAIN4Q8IVV8 208 aa17.71■□□□□ 0.43
SNCA-203ENST00000394986 MFSD8Q8NHS3 518 aa17.71■□□□□ 0.43
SNCA-203ENST00000394986 NAA11Q9BSU3 229 aaPredicted RBP17.71■□□□□ 0.43
SNCA-203ENST00000394986 C1orf21Q9H246 121 aa17.71■□□□□ 0.43
SNCA-203ENST00000394986 RHCGQ9UBD6 479 aa17.71■□□□□ 0.43
SNCA-203ENST00000394986 RIMS3Q9UJD0 308 aa17.71■□□□□ 0.43
SNCA-203ENST00000394986 A4GNTQ9UNA3 340 aa17.71■□□□□ 0.43
SNCA-203ENST00000394986 ADGRG4Q8IZF6 3080 aa17.7■□□□□ 0.42
SNCA-203ENST00000394986 AQP7P3A6NL99 342 aa17.7■□□□□ 0.42
SNCA-203ENST00000394986 IGFBP2P18065 325 aa17.7■□□□□ 0.42
SNCA-203ENST00000394986 ATP6V1B2P21281 511 aa17.7■□□□□ 0.42
SNCA-203ENST00000394986 LTBQ06643 244 aa17.7■□□□□ 0.42
SNCA-203ENST00000394986 EXOC3L2Q2M3D2 409 aa17.7■□□□□ 0.42
SNCA-203ENST00000394986 SPATS1Q496A3 300 aa17.7■□□□□ 0.42
SNCA-203ENST00000394986 FAM69AQ5T7M9 428 aa17.7■□□□□ 0.42
SNCA-203ENST00000394986 SLC7A6OSQ96CW6 309 aaPredicted RBP17.7■□□□□ 0.42
SNCA-203ENST00000394986 NSMCE2Q96MF7 247 aa17.7■□□□□ 0.42
SNCA-203ENST00000394986 MOGAT1Q96PD6 335 aa17.7■□□□□ 0.42
SNCA-203ENST00000394986 TMEM43Q9BTV4 400 aa17.7■□□□□ 0.42
SNCA-203ENST00000394986 GP6Q9HCN6 339 aa17.7■□□□□ 0.42
SNCA-203ENST00000394986 PRPF19Q9UMS4 504 aaKnown RBP17.7■□□□□ 0.42
SNCA-203ENST00000394986 SAMD4AQ9UPU9 718 aaKnown RBP17.7■□□□□ 0.42
SNCA-203ENST00000394986 SETXQ7Z333 2677 aaKnown RBP17.69■□□□□ 0.42
SNCA-203ENST00000394986 IGKV3D-15A0A087WSY6 115 aa17.69■□□□□ 0.42
SNCA-203ENST00000394986 M0R082 166 aa17.69■□□□□ 0.42
SNCA-203ENST00000394986 BGLAPP02818 100 aa17.69■□□□□ 0.42
SNCA-203ENST00000394986 GTF2E2P29084 291 aaKnown RBP17.69■□□□□ 0.42
SNCA-203ENST00000394986 GRPRP30550 384 aa17.69■□□□□ 0.42
SNCA-203ENST00000394986 TTC33Q6PID6 262 aaPredicted RBP17.69■□□□□ 0.42
SNCA-203ENST00000394986 C5orf46Q6UWT4 87 aa17.69■□□□□ 0.42
SNCA-203ENST00000394986 TFAP2EQ6VUC0 442 aa17.69■□□□□ 0.42
SNCA-203ENST00000394986 GPAT4Q86UL3 456 aa17.69■□□□□ 0.42
SNCA-203ENST00000394986 ARHGAP24Q8N264 748 aa17.69■□□□□ 0.42
SNCA-203ENST00000394986 C10orf53Q8N6V4 93 aa17.69■□□□□ 0.42
SNCA-203ENST00000394986 ACBD4Q8NC06 268 aa17.69■□□□□ 0.42
SNCA-203ENST00000394986 ZNF417Q8TAU3 575 aa17.69■□□□□ 0.42
SNCA-203ENST00000394986 TMEM255BQ8WV15 326 aa17.69■□□□□ 0.42
SNCA-203ENST00000394986 CCDC124Q96CT7 223 aaKnown RBP17.69■□□□□ 0.42
SNCA-203ENST00000394986 PRRC1Q96M27 445 aa17.69■□□□□ 0.42
SNCA-203ENST00000394986 ZNF587Q96SQ5 575 aaPredicted RBP17.69■□□□□ 0.42
SNCA-203ENST00000394986 EPYCQ99645 322 aa17.69■□□□□ 0.42
SNCA-203ENST00000394986 THTPAQ9BU02 230 aa17.69■□□□□ 0.42
SNCA-203ENST00000394986 ZNF426Q9BUY5 554 aa17.69■□□□□ 0.42
SNCA-203ENST00000394986 POLR2J2Q9GZM3 115 aaKnown RBP17.69■□□□□ 0.42
SNCA-203ENST00000394986 ENKD1Q9H0I2 346 aa17.69■□□□□ 0.42
SNCA-203ENST00000394986 POLR2J3Q9H1A7 115 aaKnown RBP17.69■□□□□ 0.42
SNCA-203ENST00000394986 PLSCR4Q9NRQ2 329 aa17.69■□□□□ 0.42
SNCA-203ENST00000394986 ZNF724A8MTY0 619 aa17.68■□□□□ 0.42
SNCA-203ENST00000394986 FFAR1O14842 300 aa17.68■□□□□ 0.42
SNCA-203ENST00000394986 OR2T1O43869 369 aa17.68■□□□□ 0.42
SNCA-203ENST00000394986 COX6B1P14854 86 aa17.68■□□□□ 0.42
SNCA-203ENST00000394986 NTF4P34130 210 aa17.68■□□□□ 0.42
SNCA-203ENST00000394986 SLC16A1P53985 500 aa17.68■□□□□ 0.42
SNCA-203ENST00000394986 UGT2B15P54855 530 aa17.68■□□□□ 0.42
SNCA-203ENST00000394986 FAM27E3Q08E93 113 aa17.68■□□□□ 0.42
SNCA-203ENST00000394986 BNIP1Q12981 228 aa17.68■□□□□ 0.42
SNCA-203ENST00000394986 SLC17A1Q14916 467 aa17.68■□□□□ 0.42
SNCA-203ENST00000394986 PDK3Q15120 406 aa17.68■□□□□ 0.42
SNCA-203ENST00000394986 KDM8Q8N371 416 aa17.68■□□□□ 0.42
SNCA-203ENST00000394986 MPP4Q96JB8 637 aa17.68■□□□□ 0.42
SNCA-203ENST00000394986 MEPEQ9NQ76 525 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms