RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 ESCO2Q56NI9 601 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 CEP78Q5JTW2 689 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 DCAF12Q5T6F0 453 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 CBLN3Q6UW01 205 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 DHRS13Q6UX07 377 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 HSDL2Q6YN16 418 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 Q6ZS46 218 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 MBOAT2Q6ZWT7 520 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 CPEB2Q7Z5Q1 589 aaKnown RBP6.34□□□□□ -1.39
RTN4-205ENST00000394609 KIF18BQ86Y91 864 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 RDH10Q8IZV5 341 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 C7orf57Q8NEG2 295 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 FAM83FQ8NEG4 500 aaPredicted RBP6.34□□□□□ -1.39
RTN4-205ENST00000394609 NFAM1Q8NET5 270 aaPredicted RBP6.34□□□□□ -1.39
RTN4-205ENST00000394609 PFN4Q8NHR9 129 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 PIGXQ8TBF5 258 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 PHOSPHO1Q8TCT1 267 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 ACOT11Q8WXI4 607 aaPredicted RBP6.34□□□□□ -1.39
RTN4-205ENST00000394609 NR4A3Q92570 626 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 OMA1Q96E52 524 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 ZC3HAV1LQ96H79 300 aaKnown RBP6.34□□□□□ -1.39
RTN4-205ENST00000394609 IL4I1Q96RQ9 567 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 SDHCQ99643 169 aaPredicted RBP6.34□□□□□ -1.39
RTN4-205ENST00000394609 LPAR4Q99677 370 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 WDR77Q9BQA1 342 aaPredicted RBP6.34□□□□□ -1.39
RTN4-205ENST00000394609 PRSS27Q9BQR3 290 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 ZNF559Q9BR84 538 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 STRADBQ9C0K7 418 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 IRF2BPLQ9H1B7 796 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 SLC26A1Q9H2B4 701 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 ANKRD19PQ9H560 264 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 EGLN3Q9H6Z9 239 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 PARD6AQ9NPB6 346 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 C20orf141Q9NUB4 165 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 FAM86C1Q9NVL1 165 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 ZNF226Q9NYT6 803 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 PISDQ9UG56 409 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 TESQ9UGI8 421 aaKnown RBP6.34□□□□□ -1.39
RTN4-205ENST00000394609 IL20RAQ9UHF4 553 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 GPN3Q9UHW5 284 aaPredicted RBP6.34□□□□□ -1.39
RTN4-205ENST00000394609 ENOPH1Q9UHY7 261 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 TBC1D24Q9ULP9 559 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 PTRH2Q9Y3E5 179 aaKnown RBP6.34□□□□□ -1.39
RTN4-205ENST00000394609 KNTC1P50748 2209 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 ZNF318Q5VUA4 2279 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 MEIOCA2RUB1 952 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 SH3D21A4FU49 640 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 OR6C76A6NM76 312 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 B4E171 279 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 GTPBP1O00178 669 aaKnown RBP6.34□□□□□ -1.39
RTN4-205ENST00000394609 WWP2O00308 870 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 CDC42EP2O14613 210 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 ZNF354AO60765 605 aaPredicted RBP6.34□□□□□ -1.39
RTN4-205ENST00000394609 FMO6PO60774 539 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 CSO75390 466 aaKnown RBP6.34□□□□□ -1.39
RTN4-205ENST00000394609 RFPL3O75679 317 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 KLF7O75840 302 aaPredicted RBP6.34□□□□□ -1.39
RTN4-205ENST00000394609 STK17BO94768 372 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 C1QBP02746 253 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 UMODP07911 640 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 JMJD7P0C870 316 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 PRKACBP22694 351 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 GADD45AP24522 165 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 PTBP1P26599 531 aaKnown RBP eCLIP6.34□□□□□ -1.39
RTN4-205ENST00000394609 IFNGR2P38484 337 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 TSPAN7P41732 249 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 RGS6P49758 472 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 CCR4P51679 360 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 NUDT6P53370 316 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 CDC42P60953 191 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 DCAF7P61962 342 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 LSM3P62310 102 aaKnown RBP6.34□□□□□ -1.39
RTN4-205ENST00000394609 SCN1BQ07699 218 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 TCF15Q12870 199 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 COX10Q12887 443 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 TBRG1Q3YBR2 411 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 ALG10BQ5I7T1 473 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 CLEC12AQ5QGZ9 265 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 ARMC4Q5T2S8 1044 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 FAM198BQ6UWH4 519 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 KIRREL2Q6UWL6 708 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 CD300LDQ6UXZ3 194 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 ZNF782Q6ZMW2 699 aaPredicted RBP6.34□□□□□ -1.39
RTN4-205ENST00000394609 PTCHD4Q6ZW05 846 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 MARCH3Q86UD3 253 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 GRAMD2AQ8IUY3 354 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 LINC00471Q8N535 108 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 ESX1Q8N693 406 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 CELF2-AS1Q8N7Q2 184 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 ZNF441Q8N8Z8 693 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 GDPD1Q8N9F7 314 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 ZNF527Q8NB42 609 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 GNPDA2Q8TDQ7 276 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 TMEM239Q8WW34 195 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 KLHDC3Q9BQ90 382 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 AIFM2Q9BRQ8 373 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 COPS4Q9BT78 406 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 CDCA4Q9BXL8 241 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 PLA2G12AQ9BZM1 189 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 PAQR5Q9NXK6 330 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms