RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 EPORP19235 508 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 TLX1P31314 330 aaPredicted RBP11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 EGR3Q06889 387 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 CNTN1Q12860 1018 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 AIMP2Q13155 320 aaKnown RBP11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 CBFBQ13951 182 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 ACSM3Q53FZ2 586 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 ARMC12Q5T9G4 340 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 DEGS2Q6QHC5 323 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 PRSS55Q6UWB4 352 aaPredicted RBP11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 DNAH12Q6ZR08 3092 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 GLT6D1Q7Z4J2 308 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 RABEPKQ7Z6M1 372 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 GLB1L2Q8IW92 636 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 OR8S1Q8NH09 359 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 OR5W2Q8NH69 310 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 FGF11Q92914 225 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 ATG4CQ96DT6 458 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 FUBP3Q96I24 572 aaKnown RBP eCLIP11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 MICU1Q9BPX6 476 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 ZDHHC5Q9C0B5 715 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 PARP12Q9H0J9 701 aaKnown RBP11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 CCDC86Q9H6F5 360 aaKnown RBP11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 CBLN4Q9NTU7 201 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 CNIH4Q9P003 139 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 KLK14Q9P0G3 267 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 FBXL4Q9UKA2 621 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 MRPS23Q9Y3D9 190 aaKnown RBP11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 ZSWIM8A7E2V4 1837 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 ANKRD20A5PA0PJZ0 165 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 TMEM235A6NFC5 223 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 BCHEP06276 602 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 MRPL3P09001 348 aaKnown RBP11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 MYOGP15173 224 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 AGTR1P30556 359 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 IL2RGP31785 369 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 PCBP4P57723 403 aaKnown RBP11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 ZNF385BQ569K4 471 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 KHDRBS2Q5VWX1 349 aaKnown RBP11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 VHLLQ6RSH7 139 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 ZNF227Q86WZ6 799 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 TMEM99Q8N816 258 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 OR4K5Q8NGD3 323 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 PPP1R1CQ8WVI7 109 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 DVL3Q92997 716 aaPredicted RBP11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 PHYHIPLQ96FC7 376 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 CMTM7Q96FZ5 175 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 CAMK1GQ96NX5 476 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 CASD1Q96PB1 797 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 CIPCQ9C0C6 399 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 OR51I1Q9H343 314 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 MED20Q9H944 212 aa11.56□□□□□ -0.56
SLC28A1-203ENST00000394573 NAP1L6A6NFF2 107 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 ZNF705GA8MUZ8 300 aaPredicted RBP11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 M0R3H8 397 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 TCF21O43680 179 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 MBPP02686 304 aaPredicted RBP11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 MSX1P28360 303 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 CARD18P57730 90 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 SLC26A5P58743 744 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 SHC2P98077 582 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 ZNF674Q2M3X9 581 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 YOD1Q5VVQ6 348 aaPredicted RBP11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 C11orf87Q6NUJ2 197 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 CDC73Q6P1J9 531 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 ARMCX2Q7L311 632 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 FCRLAQ7L513 359 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 FAM129CQ86XR2 697 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 ZNF433Q8N7K0 673 aaPredicted RBP11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 GPR32P1Q8NGA4 272 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 OR5AP2Q8NGF4 316 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 SLC25A43Q8WUT9 341 aaPredicted RBP11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 RNF141Q8WVD5 230 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 RAB33BQ9H082 229 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 EXO5Q9H790 373 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 KCND3Q9UK17 655 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 ANGPT4Q9Y264 503 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 RUVBL1Q9Y265 456 aaKnown RBP11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 GABARAPH6UMI1 98 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 DCTN6O00399 190 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 FAAHO00519 579 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 STK16O75716 305 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 OR2F2O95006 317 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 PGAM2P15259 253 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 MNDAP41218 407 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 SULT1A1P50225 295 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 P2RX1P51575 399 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 ST8SIA6P61647 398 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 EFNB1P98172 346 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 OR2F1Q13607 317 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 RNASE10Q5GAN6 216 aaKnown RBP11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 TNFAIP8L2Q6P589 184 aaPredicted RBP11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 TMPRSS11FQ6ZWK6 438 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 ACBD4Q8NC06 268 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 OR10H4Q8NGA5 316 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 OR4C16Q8NGL9 310 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 RNASE8Q8TDE3 154 aaKnown RBP11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 OR8D1Q8WZ84 308 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 TAAR9Q96RI9 348 aa11.55□□□□□ -0.56
SLC28A1-203ENST00000394573 WRAP53Q9BUR4 548 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms