RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ING1Q9UK53 422 aaPredicted RBP16.91■□□□□ 0.3
PDLIM7-204ENST00000393546 TRAV36DV7A0A075B6V5 113 aa16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 IGKV3D-15A0A087WSY6 115 aa16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 GPR171O14626 319 aa16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 AKR7A3O95154 331 aa16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 SERPINA1P01009 418 aa16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 HSD17B1P14061 328 aa16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 TCN1P20061 433 aaPredicted RBP16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 RPS5P46782 204 aaKnown RBP16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 SORDQ00796 357 aa16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 OTUD3Q5T2D3 398 aaPredicted RBP16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 DEF8Q6ZN54 512 aa16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 FKBP9P1Q75LS8 142 aa16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 GALNT5Q7Z7M9 940 aa16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 TMEM99Q8N816 258 aa16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 RBM15BQ8NDT2 890 aaKnown RBP16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 ZNF300Q96RE9 604 aaPredicted RBP16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 TMEM43Q9BTV4 400 aa16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 FANCFQ9NPI8 374 aa16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 CD300AQ9UGN4 299 aa16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 RPS6KA6Q9UK32 745 aa16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 SLC7A7Q9UM01 511 aa16.9■□□□□ 0.3
PDLIM7-204ENST00000393546 IGKV1D-42A0A075B6H8 117 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 ZNF716A6NP11 495 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 ZNF814B7Z6K7 855 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 T-ENOLP0DO92 83 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 POU2F1P14859 743 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 GTF2E2P29084 291 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 IFNA8P32881 189 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 CD79BP40259 229 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 KIR2DL3P43628 341 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 PCYT1AP49585 367 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 SLC16A1P53985 500 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 TAS2R41P59536 307 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 EXOC3L2Q2M3D2 409 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 FAM69AQ5T7M9 428 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 TMEM225Q6GV28 225 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 TTC33Q6PID6 262 aaPredicted RBP16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 LINC00114Q6XXX2 140 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 BEND4Q6ZU67 534 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 P3H2Q8IVL5 708 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 FAM156AQ8NDB6 213 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 TAAR8Q969N4 342 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 SLC41A3Q96GZ6 507 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 MPP4Q96JB8 637 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 PTDSS2Q9BVG9 487 aa16.89■□□□□ 0.29
PDLIM7-204ENST00000393546 AQP7P3A6NL99 342 aa16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 RAMP1O60894 148 aa16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 VAMP5O95183 116 aa16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 OR5F1O95221 314 aa16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 THY1P04216 161 aa16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 FAM27E3Q08E93 113 aa16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 SNTB1Q13884 538 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 MFSD13AQ14CX5 517 aa16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 IFI44LQ53G44 452 aa16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 RINLQ6ZS11 566 aa16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 GDF7Q7Z4P5 450 aa16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 VTCN1Q7Z7D3 282 aa16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 OR6S1Q8NH40 331 aa16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 GEMIN6Q8WXD5 167 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 SF3B5Q9BWJ5 86 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 GORASP2Q9H8Y8 452 aa16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 C6orf203Q9P0P8 240 aaPredicted RBP16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 KCNN3Q9UGI6 736 aa16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 MAGEL2Q9UJ55 1249 aa16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 RIMS3Q9UJD0 308 aa16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 NOSIPQ9Y314 301 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 CENPEQ02224 2701 aa16.88■□□□□ 0.29
PDLIM7-204ENST00000393546 TUBAL3A6NHL2 446 aa16.87■□□□□ 0.29
PDLIM7-204ENST00000393546 FTCDNL1E5RQL4 147 aa16.87■□□□□ 0.29
PDLIM7-204ENST00000393546 LYPD3O95274 346 aa16.87■□□□□ 0.29
PDLIM7-204ENST00000393546 IFNW1P05000 195 aa16.87■□□□□ 0.29
PDLIM7-204ENST00000393546 MSX2P35548 267 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-204ENST00000393546 PIN1Q13526 163 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-204ENST00000393546 SLC17A1Q14916 467 aa16.87■□□□□ 0.29
PDLIM7-204ENST00000393546 TFAP2EQ6VUC0 442 aa16.87■□□□□ 0.29
PDLIM7-204ENST00000393546 TSPYL5Q86VY4 417 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-204ENST00000393546 ZNF100Q8IYN0 542 aa16.87■□□□□ 0.29
PDLIM7-204ENST00000393546 ARHGAP24Q8N264 748 aa16.87■□□□□ 0.29
PDLIM7-204ENST00000393546 C10orf53Q8N6V4 93 aa16.87■□□□□ 0.29
PDLIM7-204ENST00000393546 HSH2DQ96JZ2 352 aa16.87■□□□□ 0.29
PDLIM7-204ENST00000393546 DCAF13Q9NV06 445 aaKnown RBP16.87■□□□□ 0.29
PDLIM7-204ENST00000393546 PARPBPQ9NWS1 579 aa16.87■□□□□ 0.29
PDLIM7-204ENST00000393546 NDRG3Q9UGV2 375 aa16.87■□□□□ 0.29
PDLIM7-204ENST00000393546 SAMD4AQ9UPU9 718 aaKnown RBP16.87■□□□□ 0.29
PDLIM7-204ENST00000393546 RASD1Q9Y272 281 aa16.87■□□□□ 0.29
PDLIM7-204ENST00000393546 ADGRG4Q8IZF6 3080 aa16.87■□□□□ 0.29
PDLIM7-204ENST00000393546 NBPF19A0A087WUL8 3843 aa16.87■□□□□ 0.29
PDLIM7-204ENST00000393546 C16orf97H3BN30 126 aa16.86■□□□□ 0.29
PDLIM7-204ENST00000393546 MRPL33O75394 65 aaKnown RBP16.86■□□□□ 0.29
PDLIM7-204ENST00000393546 THRBP10828 461 aa16.86■□□□□ 0.29
PDLIM7-204ENST00000393546 PTNP21246 168 aa16.86■□□□□ 0.29
PDLIM7-204ENST00000393546 GRPRP30550 384 aa16.86■□□□□ 0.29
PDLIM7-204ENST00000393546 OR3A2P47893 321 aa16.86■□□□□ 0.29
PDLIM7-204ENST00000393546 FXNQ16595 210 aa16.86■□□□□ 0.29
PDLIM7-204ENST00000393546 GPAT4Q86UL3 456 aa16.86■□□□□ 0.29
PDLIM7-204ENST00000393546 LINC01560Q8TB33 94 aa16.86■□□□□ 0.29
PDLIM7-204ENST00000393546 AMBRA1Q9C0C7 1298 aa16.86■□□□□ 0.29
PDLIM7-204ENST00000393546 KLHL4Q9C0H6 718 aa16.86■□□□□ 0.29
PDLIM7-204ENST00000393546 C1orf21Q9H246 121 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms