RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 RDH16O75452 317 aa17.27■□□□□ 0.36
CBX1-202ENST00000393408 HOXB2P14652 356 aa17.27■□□□□ 0.36
CBX1-202ENST00000393408 ZP1P60852 638 aa17.27■□□□□ 0.36
CBX1-202ENST00000393408 ZNF141Q15928 474 aa17.27■□□□□ 0.36
CBX1-202ENST00000393408 ALG11Q2TAA5 492 aa17.27■□□□□ 0.36
CBX1-202ENST00000393408 LGALSLQ3ZCW2 172 aaPredicted RBP17.27■□□□□ 0.36
CBX1-202ENST00000393408 DPY19L2P2Q6ZN68 376 aa17.27■□□□□ 0.36
CBX1-202ENST00000393408 ZPLD1Q8TCW7 415 aa17.27■□□□□ 0.36
CBX1-202ENST00000393408 ORAI1Q96D31 301 aa17.27■□□□□ 0.36
CBX1-202ENST00000393408 NMNAT3Q96T66 252 aa17.27■□□□□ 0.36
CBX1-202ENST00000393408 NMNAT2Q9BZQ4 307 aa17.27■□□□□ 0.36
CBX1-202ENST00000393408 CD93Q9NPY3 652 aa17.27■□□□□ 0.36
CBX1-202ENST00000393408 C2orf42Q9NWW7 574 aa17.27■□□□□ 0.36
CBX1-202ENST00000393408 EMC3Q9P0I2 261 aa17.27■□□□□ 0.36
CBX1-202ENST00000393408 SCP2D1Q9UJQ7 156 aa17.27■□□□□ 0.36
CBX1-202ENST00000393408 NPTNQ9Y639 398 aa17.27■□□□□ 0.36
CBX1-202ENST00000393408 NPIPB9F8W1W9 429 aa17.27■□□□□ 0.35
CBX1-202ENST00000393408 HPXP02790 462 aa17.27■□□□□ 0.35
CBX1-202ENST00000393408 SPI1P17947 270 aa17.27■□□□□ 0.35
CBX1-202ENST00000393408 RPL4P36578 427 aaKnown RBP17.27■□□□□ 0.35
CBX1-202ENST00000393408 CCR9P51686 369 aa17.27■□□□□ 0.35
CBX1-202ENST00000393408 GPR143P51810 404 aa17.27■□□□□ 0.35
CBX1-202ENST00000393408 VSX2P58304 361 aaPredicted RBP17.27■□□□□ 0.35
CBX1-202ENST00000393408 ZNHIT3Q15649 155 aaPredicted RBP17.27■□□□□ 0.35
CBX1-202ENST00000393408 SLC35D3Q5M8T2 416 aa17.27■□□□□ 0.35
CBX1-202ENST00000393408 HES5Q5TA89 166 aa17.27■□□□□ 0.35
CBX1-202ENST00000393408 LINGO2Q7L985 606 aa17.27■□□□□ 0.35
CBX1-202ENST00000393408 CDH24Q86UP0 819 aa17.27■□□□□ 0.35
CBX1-202ENST00000393408 OR8H3Q8N146 312 aa17.27■□□□□ 0.35
CBX1-202ENST00000393408 PIAS4Q8N2W9 510 aaPredicted RBP17.27■□□□□ 0.35
CBX1-202ENST00000393408 SLC25A38Q96DW6 304 aa17.27■□□□□ 0.35
CBX1-202ENST00000393408 HSPA12BQ96MM6 686 aa17.27■□□□□ 0.35
CBX1-202ENST00000393408 CERS4Q9HA82 394 aa17.27■□□□□ 0.35
CBX1-202ENST00000393408 POT1Q9NUX5 634 aa17.27■□□□□ 0.35
CBX1-202ENST00000393408 A0A0J9YY10 115 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 OR6C68A6NDL8 312 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 IFITM5A6NNB3 132 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 TNFRSF10CO14798 259 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 GMDSO60547 372 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 PEX14O75381 377 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 DNASE1P24855 282 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 FAM69AQ5T7M9 428 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 SEZ6L2Q6UXD5 910 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 OR11G2Q8NGC1 345 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 SUN5Q8TC36 379 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 MARVELD3Q96A59 401 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 ELSPBP1Q96BH3 223 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 MRPL48Q96GC5 212 aaKnown RBP17.26■□□□□ 0.35
CBX1-202ENST00000393408 VSTM2LQ96N03 204 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 FBRSQ9HAH7 460 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 BEX1Q9HBH7 125 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 HRASLSQ9HDD0 168 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 EIF3KQ9UBQ5 218 aaKnown RBP17.26■□□□□ 0.35
CBX1-202ENST00000393408 RCE1Q9Y256 329 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 LRP4O75096 1905 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 EML5Q05BV3 1969 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 A0A1B0GTQ1 180 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 AIPO00170 330 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 KHNYNO15037 678 aaKnown RBP17.26■□□□□ 0.35
CBX1-202ENST00000393408 ARPC3O15145 178 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 HCRTR1O43613 425 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 DPP4P27487 766 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 AP2S1P53680 142 aaPredicted RBP17.26■□□□□ 0.35
CBX1-202ENST00000393408 HSF2Q03933 536 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 NDUFAF6Q330K2 333 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 GXYLT1Q4G148 440 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 TMEM255AQ5JRV8 349 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 OR6C4Q8NGE1 309 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 SIPA1Q96FS4 1042 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 LMAN2LQ9H0V9 348 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 SLC25A18Q9H1K4 315 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 MRPL15Q9P015 296 aaKnown RBP17.26■□□□□ 0.35
CBX1-202ENST00000393408 DTX4Q9Y2E6 619 aa17.26■□□□□ 0.35
CBX1-202ENST00000393408 A0A087WUJ7 227 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 ACOD1A6NK06 481 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 IDSB3KWA1 339 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 HRKO00198 91 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 PDCD5O14737 125 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 SHOXO15266 292 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 FOXS1O43638 330 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 TOR2AQ5JU69 321 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 SFRP4Q6FHJ7 346 aaPredicted RBP17.25■□□□□ 0.35
CBX1-202ENST00000393408 NPSR1Q6W5P4 371 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 OR6K6Q8NGW6 343 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 OR52I2Q8NH67 350 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 GCDHQ92947 438 aaPredicted RBP17.25■□□□□ 0.35
CBX1-202ENST00000393408 RASD2Q96D21 266 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 NXPE2Q96DL1 559 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 ZNF436Q9C0F3 470 aaPredicted RBP17.25■□□□□ 0.35
CBX1-202ENST00000393408 SPRTNQ9H040 489 aaPredicted RBP17.25■□□□□ 0.35
CBX1-202ENST00000393408 HRASLS2Q9NWW9 162 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 NKIRAS2Q9NYR9 191 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 FLVCR2Q9UPI3 526 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 ZNF281Q9Y2X9 895 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 G3V3Q6 166 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 GABARAPH6UMI1 98 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 MEN1O00255 615 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 NANOS3P60323 173 aaKnown RBP17.25■□□□□ 0.35
CBX1-202ENST00000393408 ZSWIM7Q19AV6 140 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 FAM109BQ6ICB4 259 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms