RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 HOXB1P14653 301 aaPredicted RBP11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 EDNRAP25101 427 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 CD40P25942 277 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 TTKP33981 857 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 DSCR9P59020 149 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 TNK1Q13470 666 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 OR7A5Q15622 319 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 LRIF1Q5T3J3 769 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 ZNF544Q6NX49 715 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 CASP12Q6UXS9 341 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 Q71RC1 249 aaPredicted RBP11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 AAED1Q7RTV5 226 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 NET1Q7Z628 596 aaPredicted RBP11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 FBXL14Q8N1E6 418 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 CADM2Q8N3J6 435 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 TMEM99Q8N816 258 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 KBTBD8Q8NFY9 601 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 OR52N5Q8NH56 324 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 MFSD8Q8NHS3 518 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 TMEM19Q96HH6 336 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 PAIP1Q9H074 479 aaKnown RBP11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 SLCO5A1Q9H2Y9 848 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 RABEP2Q9H5N1 569 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 TCF7L2Q9NQB0 619 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 SLC6A13Q9NSD5 602 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 CBLN4Q9NTU7 201 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 POU2F3Q9UKI9 436 aa11.96□□□□□ -0.49
TRBV4-1-201ENST00000390357 ZC3H12DA2A288 527 aaKnown RBP11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 C5orf58C9J3I9 102 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 RAMP1O60894 148 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 CD8AP01732 235 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 ITGA5P08648 1049 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 CDH11P55287 796 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 C1orf140Q5VVS0 124 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 BLOC1S3Q6QNY0 202 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 SLC22A25Q6T423 547 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 MAVSQ7Z434 540 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 KRT73Q86Y46 540 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 CLIP4Q8N3C7 705 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 LSMEM1Q8N8F7 131 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 ANKK1Q8NFD2 765 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 OR9K2Q8NGE7 335 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 VPS33AQ96AX1 596 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 HS6ST2Q96MM7 605 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 RHNO1Q9BSD3 238 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 SLC17A5Q9NRA2 495 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 SLC7A10Q9NS82 523 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 VPS13CQ709C8 3753 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 USF3Q68DE3 2245 aa11.95□□□□□ -0.5
TRBV4-1-201ENST00000390357 NAV3Q8IVL0 2385 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 EVPLLA8MZ36 301 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 NPIPB7O75200 414 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 KRT33AO76009 404 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 AKR7A3O95154 331 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 AHSA1O95433 338 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 PNMTP11086 282 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 PRKAR1BP31321 381 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 APOBEC3AP31941 199 aaPredicted RBP11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 FABP6P51161 128 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 ATP4BP51164 291 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 CHRNB3Q05901 458 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 VEZF1Q14119 521 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 TSPO2Q5TGU0 170 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 REEP3Q6NUK4 255 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 KLHL24Q6TFL4 600 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 CREB3L2Q70SY1 520 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 GPAT4Q86UL3 456 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 MUC15Q8N387 334 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 ZIC4Q8N9L1 334 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 WDR31Q8NA23 367 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 OR52E4Q8NGH9 312 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 OR9I1Q8NGQ6 314 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 DNAJA4Q8WW22 397 aaPredicted RBP11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 STON2Q8WXE9 905 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 NEUROG1Q92886 237 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 ZBTB9Q96C00 473 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 SPDL1Q96EA4 605 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 DNAJA3Q96EY1 480 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 REG4Q9BYZ8 158 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 LINC00470Q9BZP3 86 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 NPAP1Q9NZP6 1156 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 RPS6KB2Q9UBS0 482 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 PMF1-BGLAPU3KQ54 211 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 CADP27708 2225 aa11.94□□□□□ -0.5
TRBV4-1-201ENST00000390357 LOC102725191A0A1B0GVB3 256 aa11.93□□□□□ -0.5
TRBV4-1-201ENST00000390357 PRORSD1PA6NEY8 169 aa11.93□□□□□ -0.5
TRBV4-1-201ENST00000390357 M0R1B8 84 aa11.93□□□□□ -0.5
TRBV4-1-201ENST00000390357 SERPINB7O75635 380 aa11.93□□□□□ -0.5
TRBV4-1-201ENST00000390357 TP53P04637 393 aaPredicted RBP11.93□□□□□ -0.5
TRBV4-1-201ENST00000390357 GPX2P18283 190 aa11.93□□□□□ -0.5
TRBV4-1-201ENST00000390357 GTF2E2P29084 291 aaKnown RBP11.93□□□□□ -0.5
TRBV4-1-201ENST00000390357 CDKN1AP38936 164 aa11.93□□□□□ -0.5
TRBV4-1-201ENST00000390357 IDH3AP50213 366 aa11.93□□□□□ -0.5
TRBV4-1-201ENST00000390357 ZNF83P51522 516 aa11.93□□□□□ -0.5
TRBV4-1-201ENST00000390357 MFSD13AQ14CX5 517 aa11.93□□□□□ -0.5
TRBV4-1-201ENST00000390357 RAB35Q15286 201 aa11.93□□□□□ -0.5
TRBV4-1-201ENST00000390357 C3orf36Q3SXR2 165 aa11.93□□□□□ -0.5
TRBV4-1-201ENST00000390357 FAM91A1Q658Y4 838 aa11.93□□□□□ -0.5
TRBV4-1-201ENST00000390357 SLC2A7Q6PXP3 512 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms