RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 SELENOHQ8IZQ5 122 aaKnown RBP-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 NDUFAF2Q8N183 169 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 C1orf158Q8N1D5 194 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 NUP93Q8N1F7 819 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 MUC15Q8N387 334 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 TTC39CQ8N584 583 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 TRPC4APQ8TEL6 797 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 GIPC3Q8TF64 312 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 UBTD2Q8WUN7 234 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 MBD3L1Q8WWY6 194 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 BAALCQ8WXS3 180 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 PHYHIPQ92561 330 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 OR2M2Q96R28 347 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 AMELXQ99217 191 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 SDF2Q99470 211 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 SLC26A6Q9BXS9 759 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 MS4A8Q9BY19 250 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 ZNF717Q9BY31 904 aaPredicted RBP-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 SIGLEC1Q9BZZ2 1709 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 SETD5Q9C0A6 1442 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 RANBP17Q9H2T7 1088 aaKnown RBP-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 DPEP2Q9H4A9 486 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 ITM2CQ9NQX7 267 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 RASSF1Q9NS23 344 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 NLE1Q9NVX2 485 aaPredicted RBP-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 CLIC5Q9NZA1 410 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 CD274Q9NZQ7 290 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 MLXQ9UH92 298 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 NUFIP1Q9UHK0 495 aaKnown RBP-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 MFHAS1Q9Y4C4 1052 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 ANK1P16157 1881 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 DENND4BO75064 1496 aaPredicted RBP-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 SH3TC1Q8TE82 1336 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 TRBV20-1A0A075B6N2 111 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 TRGV4A0A0C4DH28 118 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 A0A0J9YVX5 310 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 A0A1W2PRF3 423 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 LINC01546A6NGU7 62 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 A8MVM7 634 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 ZNF99A8MXY4 864 aaPredicted RBP-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 G3V3Y1 287 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 BHLHE40O14503 412 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 PPIP5K2O43314 1243 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 LCMT2O60294 686 aaKnown RBP-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 CACNG3O60359 315 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 LYPLA1O75608 230 aaPredicted RBP-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 OPN1MWP04001 364 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 SEMG1P04279 462 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 ERCC1P07992 297 aaPredicted RBP-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 OPN1MW2P0DN77 364 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 OPN1MW3P0DN78 364 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 ZNF25P17030 456 aaPredicted RBP-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 IDSP22304 550 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 TNFSF4P23510 183 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 CALRP27797 417 aaKnown RBP-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 SERPINB6P35237 376 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 CHKAP35790 457 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 CDKN2CP42773 168 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 HCAR3P49019 387 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 GFERP55789 205 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 NLRP11P59045 1033 aaKnown RBP-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 STARD6P59095 220 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 KLRD1Q13241 179 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 TPBGQ13641 420 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 MAD2L1BPQ15013 274 aaPredicted RBP-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 RALBP1Q15311 655 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 ZMYND11Q15326 602 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 NFIL3Q16649 462 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 TMEM249Q2WGJ8 235 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 ANKRD55Q3KP44 614 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 YIF1BQ5BJH7 314 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 TNFAIP8L3Q5GJ75 292 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 GPRC6AQ5T6X5 926 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 OR2T5Q6IEZ7 315 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 RAB12Q6IQ22 244 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 TSSK4Q6SA08 328 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 SEPT14Q6ZU15 432 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 TMPRSS11FQ6ZWK6 438 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 ZNF767PQ75MW2 155 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 C6orf120Q7Z4R8 191 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 NLRP14Q86W24 1093 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 HORMAD1Q86X24 394 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 NBPF5PQ86XG9 351 aaPredicted RBP-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 DZIP1Q86YF9 867 aaKnown RBP-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 GRAMD2AQ8IUY3 354 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 TMTC2Q8N394 836 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 DAND5Q8N907 189 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 SLC4A11Q8NBS3 891 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 CCNYQ8ND76 341 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 PLPP5Q8NEB5 264 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 OR4D11Q8NGI4 311 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 OR4C15Q8NGM1 316 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 OR10Q1Q8NGQ4 319 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 OR2T29Q8NH02 315 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 OR4A5Q8NH83 315 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 SGMS2Q8NHU3 365 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 CCL4L1Q8NHW4 92 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 RAB3IL1Q8TBN0 382 aa-1.54□□□□□ -2.66
RNU6-540P-201ENST00000384622 CRYGNQ8WXF5 182 aa-1.54□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms