RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 LIMS1P48059 325 aa13.83□□□□□ -0.2
PDGFB-202ENST00000381551 SPIBQ01892 262 aa13.83□□□□□ -0.2
PDGFB-202ENST00000381551 PMPCAQ10713 525 aa13.83□□□□□ -0.2
PDGFB-202ENST00000381551 SEC23BQ15437 767 aa13.83□□□□□ -0.2
PDGFB-202ENST00000381551 ZNF239Q16600 458 aaKnown RBP13.83□□□□□ -0.2
PDGFB-202ENST00000381551 TMEM211Q6ICI0 200 aa13.83□□□□□ -0.2
PDGFB-202ENST00000381551 OR2T5Q6IEZ7 315 aa13.83□□□□□ -0.2
PDGFB-202ENST00000381551 MBOAT2Q6ZWT7 520 aa13.83□□□□□ -0.2
PDGFB-202ENST00000381551 FJX1Q86VR8 437 aa13.83□□□□□ -0.2
PDGFB-202ENST00000381551 C9orf106Q8NAJ2 232 aa13.83□□□□□ -0.2
PDGFB-202ENST00000381551 OR2T29Q8NH02 315 aa13.83□□□□□ -0.2
PDGFB-202ENST00000381551 PFN4Q8NHR9 129 aa13.83□□□□□ -0.2
PDGFB-202ENST00000381551 MBD3L2Q8NHZ7 208 aaPredicted RBP13.83□□□□□ -0.2
PDGFB-202ENST00000381551 MOGAT1Q96PD6 335 aa13.83□□□□□ -0.2
PDGFB-202ENST00000381551 ALPK1Q96QP1 1244 aa13.83□□□□□ -0.2
PDGFB-202ENST00000381551 TM9SF2Q99805 663 aa13.83□□□□□ -0.2
PDGFB-202ENST00000381551 PRRG4Q9BZD6 226 aa13.83□□□□□ -0.2
PDGFB-202ENST00000381551 KLHL4Q9C0H6 718 aa13.83□□□□□ -0.2
PDGFB-202ENST00000381551 C20orf141Q9NUB4 165 aa13.83□□□□□ -0.2
PDGFB-202ENST00000381551 AP4S1Q9Y587 144 aa13.83□□□□□ -0.2
PDGFB-202ENST00000381551 KIAA1549Q9HCM3 1950 aa13.83□□□□□ -0.2
PDGFB-202ENST00000381551 MYO7BQ6PIF6 2116 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 IGHV3-15A0A0B4J1V0 119 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 ZNF814B7Z6K7 855 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 LRRN3E7EW58 273 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 J3QKU1 62 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 SMAD9O15198 467 aaKnown RBP13.82□□□□□ -0.2
PDGFB-202ENST00000381551 ENTPD5O75356 428 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 AKR7A3O95154 331 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 RCBTB2O95199 551 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 CH25HO95992 272 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 CST1P01037 141 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 CEACAM8P31997 349 aaPredicted RBP13.82□□□□□ -0.2
PDGFB-202ENST00000381551 CTBP2P56545 445 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 NUP107P57740 925 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 PRKCDQ05655 676 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 ZNF74Q16587 644 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 FGD3Q5JSP0 725 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 PAQR6Q6TCH4 344 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 ZNF730Q6ZMV8 503 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 FCRLAQ7L513 359 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 RRM2BQ7LG56 351 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 NRMQ8IXM6 262 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 C10orf67Q8IYJ2 551 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 TMEM99Q8N816 258 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 OR4C15Q8NGM1 316 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 ZHX1-C8orf76Q96EF9 292 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 NAA11Q9BSU3 229 aaPredicted RBP13.82□□□□□ -0.2
PDGFB-202ENST00000381551 RNF122Q9H9V4 155 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 LYVE1Q9Y5Y7 322 aa13.82□□□□□ -0.2
PDGFB-202ENST00000381551 SH3PXD2BA1X283 911 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 TNFRSF11BO00300 401 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 HNRNPRO43390 633 aaKnown RBP13.81□□□□□ -0.2
PDGFB-202ENST00000381551 PIP5K1CO60331 668 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 CYTIPO60759 359 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 TIPRLO75663 272 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 MT-ATP6P00846 226 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 FUT1P19526 365 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 CBLP22681 906 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 GRPRP30550 384 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 P2RY4P51582 365 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 PPP1R8Q12972 351 aaKnown RBP13.81□□□□□ -0.2
PDGFB-202ENST00000381551 MFSD13AQ14CX5 517 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 EXOC3L2Q2M3D2 409 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 GTF2IRD2BQ6EKJ0 949 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 PPP4R4Q6NUP7 873 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 NCCRP1Q6ZVX7 275 aaPredicted RBP13.81□□□□□ -0.2
PDGFB-202ENST00000381551 P4HA3Q7Z4N8 544 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 GTF2IRD2Q86UP8 949 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 CCDC103Q8IW40 242 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 SLC43A2Q8N370 569 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 C10orf53Q8N6V4 93 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 LRRC17Q8N6Y2 441 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 RNF128Q8TEB7 428 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 LIPHQ8WWY8 451 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 PYDC1Q8WXC3 89 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 BPIFA2Q96DR5 249 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 SGTBQ96EQ0 304 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 REEP1Q9H902 201 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 VNN3Q9NY84 501 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 DNAJB9Q9UBS3 223 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 TMCC3Q9ULS5 477 aa13.81□□□□□ -0.2
PDGFB-202ENST00000381551 PHF3Q92576 2039 aaKnown RBP13.81□□□□□ -0.2
PDGFB-202ENST00000381551 ARHGAP21Q5T5U3 1957 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 A0A0G2JNJ9 132 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 AQP7P3A6NL99 342 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 ENO4A6NNW6 628 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 CLOCKO15516 846 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 RAMP1O60894 148 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 IL2RAP01589 272 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 ASAH2BP0C7U1 165 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 FCGR2AP12318 317 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 IFI30P13284 250 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 RNPS1Q15287 305 aaKnown RBP13.8□□□□□ -0.2
PDGFB-202ENST00000381551 OTUD3Q5T2D3 398 aaPredicted RBP13.8□□□□□ -0.2
PDGFB-202ENST00000381551 RIPPLY2Q5TAB7 128 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 OR2A2Q6IF42 318 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 TMPRSS11FQ6ZWK6 438 aa13.8□□□□□ -0.2
PDGFB-202ENST00000381551 H1FNTQ75WM6 255 aaPredicted RBP13.8□□□□□ -0.2
PDGFB-202ENST00000381551 MAMDC2Q7Z304 686 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms