RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 SLC35A1P78382 337 aa16.82■□□□□ 0.28
SMN2-202ENST00000380742 PON3Q15166 354 aa16.82■□□□□ 0.28
SMN2-202ENST00000380742 ZNF239Q16600 458 aaKnown RBP16.82■□□□□ 0.28
SMN2-202ENST00000380742 RPTNQ6XPR3 784 aa16.82■□□□□ 0.28
SMN2-202ENST00000380742 RRM2BQ7LG56 351 aa16.82■□□□□ 0.28
SMN2-202ENST00000380742 SLC46A3Q7Z3Q1 461 aa16.82■□□□□ 0.28
SMN2-202ENST00000380742 RPRMLQ8N4K4 120 aa16.82■□□□□ 0.28
SMN2-202ENST00000380742 C10orf53Q8N6V4 93 aa16.82■□□□□ 0.28
SMN2-202ENST00000380742 LRRC17Q8N6Y2 441 aa16.82■□□□□ 0.28
SMN2-202ENST00000380742 STMN2Q93045 179 aa16.82■□□□□ 0.28
SMN2-202ENST00000380742 CPNE4Q96A23 557 aaPredicted RBP16.82■□□□□ 0.28
SMN2-202ENST00000380742 BPIFA2Q96DR5 249 aa16.82■□□□□ 0.28
SMN2-202ENST00000380742 TRIB1Q96RU8 372 aa16.82■□□□□ 0.28
SMN2-202ENST00000380742 TAPBPLQ9BX59 468 aa16.82■□□□□ 0.28
SMN2-202ENST00000380742 KLHL4Q9C0H6 718 aa16.82■□□□□ 0.28
SMN2-202ENST00000380742 TIGARQ9NQ88 270 aa16.82■□□□□ 0.28
SMN2-202ENST00000380742 CLCF1Q9UBD9 225 aa16.82■□□□□ 0.28
SMN2-202ENST00000380742 SH3BGRL2Q9UJC5 107 aa16.82■□□□□ 0.28
SMN2-202ENST00000380742 ESPL1Q14674 2120 aa16.81■□□□□ 0.28
SMN2-202ENST00000380742 IGHV3-15A0A0B4J1V0 119 aa16.81■□□□□ 0.28
SMN2-202ENST00000380742 ZNF814B7Z6K7 855 aa16.81■□□□□ 0.28
SMN2-202ENST00000380742 AKR7A3O95154 331 aa16.81■□□□□ 0.28
SMN2-202ENST00000380742 TGM6O95932 706 aa16.81■□□□□ 0.28
SMN2-202ENST00000380742 MAKP20794 623 aa16.81■□□□□ 0.28
SMN2-202ENST00000380742 ENPP1P22413 925 aa16.81■□□□□ 0.28
SMN2-202ENST00000380742 GRPRP30550 384 aa16.81■□□□□ 0.28
SMN2-202ENST00000380742 DNAJA1P31689 397 aaKnown RBP16.81■□□□□ 0.28
SMN2-202ENST00000380742 OMPP47874 163 aa16.81■□□□□ 0.28
SMN2-202ENST00000380742 AGFG1P52594 562 aaKnown RBP16.81■□□□□ 0.28
SMN2-202ENST00000380742 H3F3AP84243 136 aa16.81■□□□□ 0.28
SMN2-202ENST00000380742 C1orf185Q5T7R7 199 aa16.81■□□□□ 0.28
SMN2-202ENST00000380742 FNDC9Q8TBE3 224 aa16.81■□□□□ 0.28
SMN2-202ENST00000380742 ROBO4Q8WZ75 1007 aa16.81■□□□□ 0.28
SMN2-202ENST00000380742 SGTBQ96EQ0 304 aa16.81■□□□□ 0.28
SMN2-202ENST00000380742 UCN2Q96RP3 112 aa16.81■□□□□ 0.28
SMN2-202ENST00000380742 SEMA6AQ9H2E6 1030 aa16.81■□□□□ 0.28
SMN2-202ENST00000380742 SEC14L4Q9UDX3 406 aa16.81■□□□□ 0.28
SMN2-202ENST00000380742 TRGV8A0A0C4DH27 118 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 SMAD9O15198 467 aaKnown RBP16.8■□□□□ 0.28
SMN2-202ENST00000380742 DNPH1O43598 174 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 OR10H3O60404 316 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 E2F6O75461 281 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 OR7A10O76100 309 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 AQP8O94778 261 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 CCNB2O95067 398 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 MT-ATP6P00846 226 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 STSP08842 583 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 FUT1P19526 365 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 PTGER4P35408 488 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 CA7P43166 264 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 GPR4P46093 362 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 GK3PQ14409 553 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 SF3B4Q15427 424 aaKnown RBP eCLIP16.8■□□□□ 0.28
SMN2-202ENST00000380742 MICAQ29983 383 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 EIF2S3LQ2VIR3 472 aaKnown RBP16.8■□□□□ 0.28
SMN2-202ENST00000380742 NSUN5P2Q63ZY6 315 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 ZNF770Q6IQ21 691 aaPredicted RBP16.8■□□□□ 0.28
SMN2-202ENST00000380742 PPP4R4Q6NUP7 873 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 SEM1Q6ZVN7 128 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 ZER1Q7Z7L7 766 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 ATCAYQ86WG3 371 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 HS3ST5Q8IZT8 346 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 TMEM99Q8N816 258 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 OR9Q2Q8NGE9 314 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 PIGXQ8TBF5 258 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 FAM46AQ96IP4 442 aaKnown RBP16.8■□□□□ 0.28
SMN2-202ENST00000380742 GPA33Q99795 319 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 BDH2Q9BUT1 245 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 CALHM2Q9HA72 323 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 NANSQ9NR45 359 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 MCTS1Q9ULC4 181 aaKnown RBP16.8■□□□□ 0.28
SMN2-202ENST00000380742 ZNF175Q9Y473 711 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 POLEQ07864 2286 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 NBASA2RRP1 2371 aa16.8■□□□□ 0.28
SMN2-202ENST00000380742 HTR3EA5X5Y0 456 aa16.79■□□□□ 0.28
SMN2-202ENST00000380742 CD8B2A6NJW9 211 aa16.79■□□□□ 0.28
SMN2-202ENST00000380742 SLC22A20A6NK97 555 aa16.79■□□□□ 0.28
SMN2-202ENST00000380742 M0R082 166 aa16.79■□□□□ 0.28
SMN2-202ENST00000380742 RAMP1O60894 148 aa16.79■□□□□ 0.28
SMN2-202ENST00000380742 SYNGR4O95473 234 aa16.79■□□□□ 0.28
SMN2-202ENST00000380742 HOXD4P09016 255 aaPredicted RBP16.79■□□□□ 0.28
SMN2-202ENST00000380742 ASAH2BP0C7U1 165 aa16.79■□□□□ 0.28
SMN2-202ENST00000380742 P2RY4P51582 365 aa16.79■□□□□ 0.28
SMN2-202ENST00000380742 PGBD2Q6P3X8 592 aa16.79■□□□□ 0.28
SMN2-202ENST00000380742 PAQR6Q6TCH4 344 aa16.79■□□□□ 0.28
SMN2-202ENST00000380742 TMPRSS11FQ6ZWK6 438 aa16.79■□□□□ 0.28
SMN2-202ENST00000380742 CCDC103Q8IW40 242 aa16.79■□□□□ 0.28
SMN2-202ENST00000380742 ZNF417Q8TAU3 575 aa16.79■□□□□ 0.28
SMN2-202ENST00000380742 LIPHQ8WWY8 451 aa16.79■□□□□ 0.28
SMN2-202ENST00000380742 ZHX1-C8orf76Q96EF9 292 aa16.79■□□□□ 0.28
SMN2-202ENST00000380742 CENPNQ96H22 339 aaPredicted RBP16.79■□□□□ 0.28
SMN2-202ENST00000380742 ZNF587Q96SQ5 575 aaPredicted RBP16.79■□□□□ 0.28
SMN2-202ENST00000380742 FKRPQ9H9S5 495 aa16.79■□□□□ 0.28
SMN2-202ENST00000380742 ZNF229Q9UJW7 825 aa16.79■□□□□ 0.28
SMN2-202ENST00000380742 MAGED1Q9Y5V3 778 aaPredicted RBP16.79■□□□□ 0.28
SMN2-202ENST00000380742 CDC42EP2O14613 210 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 KLF4O43474 513 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 EIF1BO60739 113 aaKnown RBP16.78■□□□□ 0.28
SMN2-202ENST00000380742 CASP6P55212 293 aa16.78■□□□□ 0.28
SMN2-202ENST00000380742 MFSD13AQ14CX5 517 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms