RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 TAS2R8Q9NYW2 309 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 INTS6Q9UL03 887 aaKnown RBP11.59□□□□□ -0.55
CHD3-203ENST00000380358 SLIT1O75093 1534 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 SOCS7O14512 581 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 SLC22A2O15244 555 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 PCBP3P57721 371 aaKnown RBP11.59□□□□□ -0.55
CHD3-203ENST00000380358 SORDQ00796 357 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 TMEM41BQ5BJD5 291 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 ENTPD8Q5MY95 495 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 ZDHHC24Q6UX98 284 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 USP51Q70EK9 711 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 CLEC14AQ86T13 490 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 ACOT4Q8N9L9 421 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 DVL3Q92997 716 aaPredicted RBP11.59□□□□□ -0.55
CHD3-203ENST00000380358 SLC45A3Q96JT2 553 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 MYH3P11055 1940 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 A0A096LPE4 126 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 A0A1W2PPZ6 126 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 OR6C76A6NM76 312 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 HNRNPA1P09651 372 aaKnown RBP eCLIP11.59□□□□□ -0.55
CHD3-203ENST00000380358 CPMP14384 443 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 EN2P19622 333 aaPredicted RBP11.59□□□□□ -0.55
CHD3-203ENST00000380358 DCTP40126 519 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 SLC6A8P48029 635 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 PTTG1IPP53801 180 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 LTBQ06643 244 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 PTP4A2Q12974 167 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.59□□□□□ -0.55
CHD3-203ENST00000380358 PHYHD1Q5SRE7 291 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 YRDCQ86U90 279 aaKnown RBP11.59□□□□□ -0.55
CHD3-203ENST00000380358 WDR83Q9BRX9 315 aaKnown RBP11.59□□□□□ -0.55
CHD3-203ENST00000380358 LMF2Q9BU23 707 aaKnown RBP11.59□□□□□ -0.55
CHD3-203ENST00000380358 DIP2BQ9P265 1576 aa11.59□□□□□ -0.55
CHD3-203ENST00000380358 ANKRD61A6NGH8 418 aa11.58□□□□□ -0.55
CHD3-203ENST00000380358 NPIPB15A6NHN6 443 aaPredicted RBP11.58□□□□□ -0.55
CHD3-203ENST00000380358 J3KRW8 73 aa11.58□□□□□ -0.55
CHD3-203ENST00000380358 SORBS2O94875 1100 aaKnown RBP11.58□□□□□ -0.55
CHD3-203ENST00000380358 TIMP1P01033 207 aa11.58□□□□□ -0.55
CHD3-203ENST00000380358 TPT1P13693 172 aaKnown RBP11.58□□□□□ -0.55
CHD3-203ENST00000380358 SLC5A2P31639 672 aa11.58□□□□□ -0.55
CHD3-203ENST00000380358 APOOLQ6UXV4 268 aa11.58□□□□□ -0.55
CHD3-203ENST00000380358 HSD11B1LQ7Z5J1 315 aa11.58□□□□□ -0.55
CHD3-203ENST00000380358 OR4F15Q8NGB8 312 aa11.58□□□□□ -0.55
CHD3-203ENST00000380358 OR51H1Q8NH63 302 aa11.58□□□□□ -0.55
CHD3-203ENST00000380358 NEIL2Q969S2 332 aa11.58□□□□□ -0.55
CHD3-203ENST00000380358 FBXL2Q9UKC9 423 aa11.58□□□□□ -0.55
CHD3-203ENST00000380358 CACNG2Q9Y698 323 aa11.58□□□□□ -0.55
CHD3-203ENST00000380358 LRP5LA4QPB2 252 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 PRKRAO75569 313 aaKnown RBP11.58□□□□□ -0.56
CHD3-203ENST00000380358 ZNF865P0CJ78 1059 aaPredicted RBP11.58□□□□□ -0.56
CHD3-203ENST00000380358 RAC1P63000 192 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 PITHD1Q9GZP4 211 aaPredicted RBP11.58□□□□□ -0.56
CHD3-203ENST00000380358 IGHV3-15A0A0B4J1V0 119 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 I6L893 689 aaPredicted RBP11.58□□□□□ -0.56
CHD3-203ENST00000380358 ADAM12O43184 909 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 PRKACAP17612 351 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 DOC2BQ14184 412 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 MARCH8Q5T0T0 291 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 TAS1R1Q7RTX1 841 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 SLC7A5P1Q8MH63 180 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 OR1M1Q8NGA1 313 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 FGF13Q92913 245 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 MMP27Q9H306 513 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 MYH8P13535 1937 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 IGKV3-7A0A075B6H7 116 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 IL3RAP26951 378 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 PCBD1P61457 104 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 SOX4Q06945 474 aaPredicted RBP11.58□□□□□ -0.56
CHD3-203ENST00000380358 PEA15Q15121 130 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 NIPA2Q8N8Q9 360 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 HSD17B11Q8NBQ5 300 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 CMASQ8NFW8 434 aaPredicted RBP11.58□□□□□ -0.56
CHD3-203ENST00000380358 P2RY12Q9H244 342 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 OCEL1Q9H607 264 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 SNCGO76070 127 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 ENPP1P22413 925 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 BLVRBP30043 206 aaPredicted RBP11.58□□□□□ -0.56
CHD3-203ENST00000380358 ERVPABLB-1P60509 514 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 KCNAB1Q14722 419 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 MOGQ16653 247 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 C10orf62Q5T681 223 aaPredicted RBP11.58□□□□□ -0.56
CHD3-203ENST00000380358 PGAP1Q75T13 922 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 SYT9Q86SS6 491 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 FZR1Q9UM11 496 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 AGAP14A8MT82 685 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 ZNF587BE7ETH6 402 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 THBS1P07996 1170 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 TNFRSF4P43489 277 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 CATR1Q13166 79 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 OR8G1Q15617 311 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 TBC1D28Q2M2D7 210 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 ZNF181Q2M3W8 571 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 RAB6CQ53S08 254 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 ZNF322Q6U7Q0 402 aaPredicted RBP11.58□□□□□ -0.56
CHD3-203ENST00000380358 RAB6CQ9H0N0 254 aa11.58□□□□□ -0.56
CHD3-203ENST00000380358 HTR1EP28566 365 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 SLC39A7Q92504 469 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 ZNF443Q9Y2A4 671 aaPredicted RBP11.57□□□□□ -0.56
CHD3-203ENST00000380358 SMAD6O43541 496 aaKnown RBP11.57□□□□□ -0.56
CHD3-203ENST00000380358 SCGB1C2P0DMR2 95 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms