RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 TRIML2Q8N7C3 387 aa20.16■□□□□ 0.82
U2AF1-202ENST00000380276 MSI2Q96DH6 328 aaKnown RBP20.16■□□□□ 0.82
U2AF1-202ENST00000380276 TRNT1Q96Q11 434 aaKnown RBP20.16■□□□□ 0.82
U2AF1-202ENST00000380276 SLC38A2Q96QD8 506 aa20.16■□□□□ 0.82
U2AF1-202ENST00000380276 PANX1Q96RD7 426 aa20.16■□□□□ 0.82
U2AF1-202ENST00000380276 NUF2Q9BZD4 464 aa20.16■□□□□ 0.82
U2AF1-202ENST00000380276 TMEM45AQ9NWC5 275 aa20.16■□□□□ 0.82
U2AF1-202ENST00000380276 LGI1O95970 557 aa20.15■□□□□ 0.82
U2AF1-202ENST00000380276 CRYAAP02489 173 aa20.15■□□□□ 0.82
U2AF1-202ENST00000380276 LBPP18428 481 aa20.15■□□□□ 0.82
U2AF1-202ENST00000380276 SERPINF1P36955 418 aa20.15■□□□□ 0.82
U2AF1-202ENST00000380276 SWI5Q1ZZU3 235 aa20.15■□□□□ 0.82
U2AF1-202ENST00000380276 TBRG1Q3YBR2 411 aa20.15■□□□□ 0.82
U2AF1-202ENST00000380276 LRRC74BQ6ZQY2 392 aa20.15■□□□□ 0.82
U2AF1-202ENST00000380276 ZNF621Q6ZSS3 439 aa20.15■□□□□ 0.82
U2AF1-202ENST00000380276 FOXN4Q96NZ1 517 aa20.15■□□□□ 0.82
U2AF1-202ENST00000380276 SF3B5Q9BWJ5 86 aaKnown RBP20.15■□□□□ 0.82
U2AF1-202ENST00000380276 PRR14Q9BWN1 585 aa20.15■□□□□ 0.82
U2AF1-202ENST00000380276 ROPN1BQ9BZX4 212 aaPredicted RBP20.15■□□□□ 0.82
U2AF1-202ENST00000380276 ROPN1Q9HAT0 212 aaPredicted RBP20.15■□□□□ 0.82
U2AF1-202ENST00000380276 RAP2CQ9Y3L5 183 aa20.15■□□□□ 0.82
U2AF1-202ENST00000380276 IGHV4-61A0A0C4DH41 118 aa20.14■□□□□ 0.81
U2AF1-202ENST00000380276 CCDC154A6NI56 674 aa20.14■□□□□ 0.81
U2AF1-202ENST00000380276 LIPT2A6NK58 231 aa20.14■□□□□ 0.81
U2AF1-202ENST00000380276 VWC2LB2RUY7 222 aa20.14■□□□□ 0.81
U2AF1-202ENST00000380276 ZNF587BE7ETH6 402 aa20.14■□□□□ 0.81
U2AF1-202ENST00000380276 TYROBPO43914 113 aa20.14■□□□□ 0.81
U2AF1-202ENST00000380276 GSNP06396 782 aa20.14■□□□□ 0.81
U2AF1-202ENST00000380276 DBIP07108 87 aaKnown RBP20.14■□□□□ 0.81
U2AF1-202ENST00000380276 GKN3PP0CG01 181 aa20.14■□□□□ 0.81
U2AF1-202ENST00000380276 ETV4P43268 484 aa20.14■□□□□ 0.81
U2AF1-202ENST00000380276 MAP2K6P52564 334 aa20.14■□□□□ 0.81
U2AF1-202ENST00000380276 TUBA1BP68363 451 aa20.14■□□□□ 0.81
U2AF1-202ENST00000380276 TUBA4AP68366 448 aa20.14■□□□□ 0.81
U2AF1-202ENST00000380276 LGALS3BPQ08380 585 aa20.14■□□□□ 0.81
U2AF1-202ENST00000380276 BNIP2Q12982 314 aa20.14■□□□□ 0.81
U2AF1-202ENST00000380276 TUBA1AQ71U36 451 aa20.14■□□□□ 0.81
U2AF1-202ENST00000380276 PEX5LQ8IYB4 626 aa20.14■□□□□ 0.81
U2AF1-202ENST00000380276 OR1K1Q8NGR3 316 aa20.14■□□□□ 0.81
U2AF1-202ENST00000380276 CCDC115Q96NT0 180 aa20.14■□□□□ 0.81
U2AF1-202ENST00000380276 ALKBH3Q96Q83 286 aaPredicted RBP20.14■□□□□ 0.81
U2AF1-202ENST00000380276 MTHFD2LQ9H903 347 aaPredicted RBP20.14■□□□□ 0.81
U2AF1-202ENST00000380276 CA10Q9NS85 328 aa20.14■□□□□ 0.81
U2AF1-202ENST00000380276 BTNL2Q9UIR0 455 aa20.14■□□□□ 0.81
U2AF1-202ENST00000380276 LOC390937A0A1W2PQ73 354 aa20.13■□□□□ 0.81
U2AF1-202ENST00000380276 AQP7P3A6NL99 342 aa20.13■□□□□ 0.81
U2AF1-202ENST00000380276 TGFAP01135 160 aa20.13■□□□□ 0.81
U2AF1-202ENST00000380276 RPL14P50914 215 aaKnown RBP20.13■□□□□ 0.81
U2AF1-202ENST00000380276 COPZ1P61923 177 aa20.13■□□□□ 0.81
U2AF1-202ENST00000380276 C1QTNF12Q5T7M4 302 aa20.13■□□□□ 0.81
U2AF1-202ENST00000380276 AP1ARQ63HQ0 302 aa20.13■□□□□ 0.81
U2AF1-202ENST00000380276 NIPAL3Q6P499 406 aa20.13■□□□□ 0.81
U2AF1-202ENST00000380276 ZNF440Q8IYI8 595 aa20.13■□□□□ 0.81
U2AF1-202ENST00000380276 ZIC4Q8N9L1 334 aa20.13■□□□□ 0.81
U2AF1-202ENST00000380276 MYOZ1Q9NP98 299 aaPredicted RBP20.13■□□□□ 0.81
U2AF1-202ENST00000380276 OBP2BQ9NPH6 170 aa20.13■□□□□ 0.81
U2AF1-202ENST00000380276 RLIMQ9NVW2 624 aa20.13■□□□□ 0.81
U2AF1-202ENST00000380276 FAAHO00519 579 aa20.12■□□□□ 0.81
U2AF1-202ENST00000380276 CDKN2CP42773 168 aa20.12■□□□□ 0.81
U2AF1-202ENST00000380276 SLC1A6P48664 564 aa20.12■□□□□ 0.81
U2AF1-202ENST00000380276 SELENOPP49908 381 aa20.12■□□□□ 0.81
U2AF1-202ENST00000380276 UFM1P61960 85 aa20.12■□□□□ 0.81
U2AF1-202ENST00000380276 COX20Q5RI15 118 aa20.12■□□□□ 0.81
U2AF1-202ENST00000380276 VRK2Q86Y07 508 aa20.12■□□□□ 0.81
U2AF1-202ENST00000380276 KATNB1Q9BVA0 655 aa20.12■□□□□ 0.81
U2AF1-202ENST00000380276 BPESC1Q9GZL8 116 aa20.12■□□□□ 0.81
U2AF1-202ENST00000380276 A0A096LPE4 126 aa20.11■□□□□ 0.81
U2AF1-202ENST00000380276 A0A1W2PPZ6 126 aa20.11■□□□□ 0.81
U2AF1-202ENST00000380276 B9A039 149 aa20.11■□□□□ 0.81
U2AF1-202ENST00000380276 NR5A2O00482 541 aa20.11■□□□□ 0.81
U2AF1-202ENST00000380276 OR4A8P0C604 315 aa20.11■□□□□ 0.81
U2AF1-202ENST00000380276 NCF2P19878 526 aaPredicted RBP20.11■□□□□ 0.81
U2AF1-202ENST00000380276 THBS2P35442 1172 aa20.11■□□□□ 0.81
U2AF1-202ENST00000380276 GSTA3Q16772 222 aa20.11■□□□□ 0.81
U2AF1-202ENST00000380276 LIN52Q52LA3 116 aa20.11■□□□□ 0.81
U2AF1-202ENST00000380276 PRAMEF8Q5VWM4 474 aa20.11■□□□□ 0.81
U2AF1-202ENST00000380276 PRAMEF7Q5VXH5 474 aa20.11■□□□□ 0.81
U2AF1-202ENST00000380276 OR52P1PQ8NH57 321 aa20.11■□□□□ 0.81
U2AF1-202ENST00000380276 TEX37Q96LM6 180 aa20.11■□□□□ 0.81
U2AF1-202ENST00000380276 OR52E6Q96RD3 313 aa20.11■□□□□ 0.81
U2AF1-202ENST00000380276 C20orf27Q9GZN8 174 aa20.11■□□□□ 0.81
U2AF1-202ENST00000380276 ADAM19Q9H013 955 aa20.11■□□□□ 0.81
U2AF1-202ENST00000380276 RPS4Y1P22090 263 aaKnown RBP20.1■□□□□ 0.81
U2AF1-202ENST00000380276 VSNL1P62760 191 aa20.1■□□□□ 0.81
U2AF1-202ENST00000380276 TXNL4AP83876 142 aaKnown RBP20.1■□□□□ 0.81
U2AF1-202ENST00000380276 NAAAQ02083 359 aa20.1■□□□□ 0.81
U2AF1-202ENST00000380276 ADIPOQQ15848 244 aa20.1■□□□□ 0.81
U2AF1-202ENST00000380276 ZNF836Q6ZNA1 936 aa20.1■□□□□ 0.81
U2AF1-202ENST00000380276 ZNF540Q8NDQ6 660 aa20.1■□□□□ 0.81
U2AF1-202ENST00000380276 ZBTB18Q99592 522 aa20.1■□□□□ 0.81
U2AF1-202ENST00000380276 RAB1BQ9H0U4 201 aa20.1■□□□□ 0.81
U2AF1-202ENST00000380276 CACYBPQ9HB71 228 aaKnown RBP20.1■□□□□ 0.81
U2AF1-202ENST00000380276 P2RX2Q9UBL9 471 aa20.1■□□□□ 0.81
U2AF1-202ENST00000380276 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.1■□□□□ 0.81
U2AF1-202ENST00000380276 LRP5LA4QPB2 252 aa20.09■□□□□ 0.81
U2AF1-202ENST00000380276 A8MVM7 634 aa20.09■□□□□ 0.81
U2AF1-202ENST00000380276 FRS3O43559 492 aa20.09■□□□□ 0.81
U2AF1-202ENST00000380276 KRT75O95678 551 aa20.09■□□□□ 0.81
U2AF1-202ENST00000380276 ERCC1P07992 297 aaPredicted RBP20.09■□□□□ 0.81
U2AF1-202ENST00000380276 CECR9P0C854 216 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms