RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 MBD6Q96DN6 1003 aa4.09□□□□□ -1.76
C9orf72-203ENST00000380003 TXNDC15Q96J42 360 aa4.09□□□□□ -1.76
C9orf72-203ENST00000380003 MOGAT1Q96PD6 335 aa4.09□□□□□ -1.76
C9orf72-203ENST00000380003 ZBTB18Q99592 522 aa4.09□□□□□ -1.76
C9orf72-203ENST00000380003 SLCO5A1Q9H2Y9 848 aa4.09□□□□□ -1.76
C9orf72-203ENST00000380003 CXorf56Q9H5V9 222 aa4.09□□□□□ -1.76
C9orf72-203ENST00000380003 TCF7L2Q9NQB0 619 aa4.09□□□□□ -1.76
C9orf72-203ENST00000380003 SDR39U1Q9NRG7 319 aaPredicted RBP4.09□□□□□ -1.76
C9orf72-203ENST00000380003 ACER3Q9NUN7 267 aa4.09□□□□□ -1.76
C9orf72-203ENST00000380003 CR1P17927 2039 aa4.09□□□□□ -1.76
C9orf72-203ENST00000380003 LOC100653049A0A140TA62 436 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 POLR3GO15318 223 aaPredicted RBP4.08□□□□□ -1.76
C9orf72-203ENST00000380003 KRT34O76011 436 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 PGM3O95394 542 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 PABPC4LP0CB38 370 aaKnown RBP4.08□□□□□ -1.76
C9orf72-203ENST00000380003 IDO1P14902 403 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 FUT1P19526 365 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 CD40P25942 277 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 APOBEC1P41238 236 aaKnown RBP4.08□□□□□ -1.76
C9orf72-203ENST00000380003 CLDN17P56750 224 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 COPZ1P61923 177 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 KRTAP1-1Q07627 177 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 GABRA6Q16445 453 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 OGFOD2Q6N063 350 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 AAED1Q7RTV5 226 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 CARM1Q86X55 608 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 PEX5LQ8IYB4 626 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 MICU2Q8IYU8 434 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 C10orf53Q8N6V4 93 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 TRIML2Q8N7C3 387 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 STEAP2Q8NFT2 490 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 ST8SIA1Q92185 356 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 TAAR8Q969N4 342 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 TRNT1Q96Q11 434 aaKnown RBP4.08□□□□□ -1.76
C9orf72-203ENST00000380003 SOX7Q9BT81 388 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 REG4Q9BYZ8 158 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 PAIP1Q9H074 479 aaKnown RBP4.08□□□□□ -1.76
C9orf72-203ENST00000380003 RABEP2Q9H5N1 569 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 MTHFD2LQ9H903 347 aaPredicted RBP4.08□□□□□ -1.76
C9orf72-203ENST00000380003 PAQR5Q9NXK6 330 aaPredicted RBP4.08□□□□□ -1.76
C9orf72-203ENST00000380003 ANGPT4Q9Y264 503 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 ZNF443Q9Y2A4 671 aaPredicted RBP4.08□□□□□ -1.76
C9orf72-203ENST00000380003 ACTL7BQ9Y614 415 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 ATP23Q9Y6H3 246 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 ARHGAP32A7KAX9 2087 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 M0R082 166 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 HLA-HP01893 362 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 NQO1P15559 274 aaKnown RBP4.08□□□□□ -1.76
C9orf72-203ENST00000380003 TTKP33981 857 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 YAP1P46937 504 aaKnown RBP4.08□□□□□ -1.76
C9orf72-203ENST00000380003 OR1E2P47887 323 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 IDH3GP51553 393 aaPredicted RBP4.08□□□□□ -1.76
C9orf72-203ENST00000380003 POLR2HP52434 150 aaKnown RBP4.08□□□□□ -1.76
C9orf72-203ENST00000380003 NUDT6P53370 316 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 CLNS1AP54105 237 aaKnown RBP4.08□□□□□ -1.76
C9orf72-203ENST00000380003 CRISP3P54108 245 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 RPS4XP62701 263 aaKnown RBP4.08□□□□□ -1.76
C9orf72-203ENST00000380003 CSNK2A1P68400 391 aaPredicted RBP4.08□□□□□ -1.76
C9orf72-203ENST00000380003 PPP2R2BQ00005 443 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 EPS8Q12929 822 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 CAMK2DQ13557 499 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 GGTLC2Q14390 218 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 RAB35Q15286 201 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 KRT80Q6KB66 452 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 EPGNQ6UW88 154 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 RETREG3Q86VR2 466 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 SLC43A2Q8N370 569 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 CLDN22Q8N7P3 220 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 ZNF611Q8N823 705 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 WDR31Q8NA23 367 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 OR9K2Q8NGE7 335 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 ZNF417Q8TAU3 575 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 MIPOL1Q8TD10 442 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 LRRC8CQ8TDW0 803 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 HSD17B8Q92506 261 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 MOAP1Q96BY2 351 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 TLCD1Q96CP7 247 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 HS6ST2Q96MM7 605 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 ZNF587Q96SQ5 575 aaPredicted RBP4.08□□□□□ -1.76
C9orf72-203ENST00000380003 SAP130Q9H0E3 1048 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 TPK1Q9H3S4 243 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 CRLF2Q9HC73 371 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 YAE1D1Q9NRH1 226 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.08□□□□□ -1.76
C9orf72-203ENST00000380003 BEX4Q9NWD9 120 aaPredicted RBP4.08□□□□□ -1.76
C9orf72-203ENST00000380003 ASIC5Q9NY37 505 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 TAS2R16Q9NYV7 291 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 TREM2Q9NZC2 230 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 P2RX2Q9UBL9 471 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.08□□□□□ -1.76
C9orf72-203ENST00000380003 BTNL2Q9UIR0 455 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 EDARQ9UNE0 448 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 SLC35A3Q9Y2D2 325 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 SLC25A15Q9Y619 301 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 LIPT2A6NK58 231 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 TTC36A6NLP5 189 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 TRPC5OSA6NMA1 111 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 CPSF4LA6NMK7 179 aaKnown RBP4.08□□□□□ -1.76
C9orf72-203ENST00000380003 HPRP00739 348 aa4.08□□□□□ -1.76
C9orf72-203ENST00000380003 IL6P05231 212 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms