RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 MNX1P50219 401 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-201ENST00000379989 NDUFA6P56556 154 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 OR10A3P58181 314 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 SNRPD1P62314 119 aaKnown RBP6.91□□□□□ -1.3
CDKL5-201ENST00000379989 KIAA0141Q14154 515 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-201ENST00000379989 HNF4GQ14541 408 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 XKR6Q5GH73 641 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 C12orf73Q69YU5 71 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 CHRDL2Q6WN34 429 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-201ENST00000379989 OR4F15Q8NGB8 312 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 OR1J4Q8NGS1 313 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 NUBPLQ8TB37 319 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 PAQR8Q8TEZ7 354 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 RNFT2Q96EX2 444 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 TPT1P8Q9HAU6 139 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 SEMA3GQ9NS98 782 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 ACER3Q9NUN7 267 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 HS3ST2Q9Y278 367 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 A0A0D9SG52 128 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 KANTRA0A1W2PQU2 76 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 NPEPPSL1A6NEC2 478 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 ANKRD61A6NGH8 418 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 C5orf67F2Z3F1 127 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 GRM6O15303 877 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 SLC16A5O15375 505 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 SH3BGRLO75368 114 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 RDH16O75452 317 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 OPN1SWP03999 348 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 IL5P05113 134 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 SFTA3P0C7M3 94 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 TMIGD3P0DMS9 266 aaPredicted RBP6.9□□□□□ -1.3
CDKL5-201ENST00000379989 PKMP14618 531 aaKnown RBP6.9□□□□□ -1.3
CDKL5-201ENST00000379989 GPX2P18283 190 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 CELP19835 753 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 SERPINA4P29622 427 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 S100A3P33764 101 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 AHRP35869 848 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 TDGF1P3P51864 188 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 HMGCS1Q01581 520 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 HEPACAMQ14CZ8 416 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 OCLNQ16625 522 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 ODF4Q2M2E3 257 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 LINC00303Q3SY05 128 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 NKAPLQ5M9Q1 402 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 EOGTQ5NDL2 527 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 ELFN2Q5R3F8 820 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 RNF219Q5W0B1 726 aaPredicted RBP6.9□□□□□ -1.3
CDKL5-201ENST00000379989 OR10K2Q6IF99 312 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 PRSS55Q6UWB4 352 aaPredicted RBP6.9□□□□□ -1.3
CDKL5-201ENST00000379989 ESPNLQ6ZVH7 1005 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 ZNF546Q86UE3 836 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 C1QL4Q86Z23 238 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 VRK3Q8IV63 474 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 KCNRGQ8N5I3 272 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 SDR9C7Q8NEX9 313 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 OR8J1Q8NGP2 316 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 OR2L8Q8NGY9 312 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 RNASE8Q8TDE3 154 aaKnown RBP6.9□□□□□ -1.3
CDKL5-201ENST00000379989 GPR148Q8TDV2 347 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 NEK7Q8TDX7 302 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 UBTD2Q8WUN7 234 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 ING5Q8WYH8 240 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 COL26A1Q96A83 441 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 KCTD12Q96CX2 325 aaKnown RBP6.9□□□□□ -1.3
CDKL5-201ENST00000379989 MRGPRX4Q96LA9 322 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 VN1R3Q9BXE9 311 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 FKRPQ9H9S5 495 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 NMNAT1Q9HAN9 279 aaPredicted RBP6.9□□□□□ -1.3
CDKL5-201ENST00000379989 IL21Q9HBE4 155 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 OBP2AQ9NY56 170 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 DOK5Q9P104 306 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 LHX3Q9UBR4 397 aa6.9□□□□□ -1.3
CDKL5-201ENST00000379989 SYT5O00445 386 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 BCL2L11O43521 198 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 GCM2O75603 506 aaPredicted RBP6.9□□□□□ -1.31
CDKL5-201ENST00000379989 GUSBP08236 651 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 LIMS3P0CW19 117 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 LIMS4P0CW20 117 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 VSIG10L2P0DP72 767 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 BMP7P18075 431 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 HNF1AP20823 631 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 SMAD3P84022 425 aaKnown RBP6.9□□□□□ -1.31
CDKL5-201ENST00000379989 IL10RAQ13651 578 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 MEF2DQ14814 521 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 ACTBL2Q562R1 376 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 KHDC3LQ587J8 217 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 MESTQ5EB52 335 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 ATXN7L2Q5T6C5 722 aaPredicted RBP6.9□□□□□ -1.31
CDKL5-201ENST00000379989 FOXRED2Q8IWF2 684 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 FAM24BQ8N5W8 94 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 NKAIN3Q8N8D7 197 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 SMIM4Q8WVI0 70 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 LCN9Q8WX39 176 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 ALG14Q96F25 216 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 NOL4LQ96MY1 436 aaPredicted RBP6.9□□□□□ -1.31
CDKL5-201ENST00000379989 TUBA4BQ9H853 241 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 IL17BQ9UHF5 180 aa6.9□□□□□ -1.31
CDKL5-201ENST00000379989 TMEM272A0A1B0GTI8 110 aa6.89□□□□□ -1.31
CDKL5-201ENST00000379989 TSPAN11A1L157 253 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms