RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 TMED9Q9BVK6 235 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 TMEM27Q9HBJ8 222 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 CTSFQ9UBX1 484 aa9.94□□□□□ -0.82
NEDD9-201ENST00000379433 KIF26BQ2KJY2 2108 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 BLOC1S5-TXNDC5H3BN57 136 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 GTPBP1O00178 669 aaKnown RBP9.93□□□□□ -0.82
NEDD9-201ENST00000379433 SLC35E2P0CK97 266 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 NID1P14543 1247 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 IFNGR2P38484 337 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 TPTEP56180 551 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 PUDPQ08623 228 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 DGUOKQ16854 277 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 FAM109AQ8N4B1 249 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 SPEM1Q8N4L4 309 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 OR1L3Q8NH93 324 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 ACOT11Q8WXI4 607 aaPredicted RBP9.93□□□□□ -0.82
NEDD9-201ENST00000379433 FBXW5Q969U6 566 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 ANAPC16Q96DE5 110 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 TMEM80Q96HE8 168 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 TXN2Q99757 166 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 KLHDC3Q9BQ90 382 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 NDC1Q9BTX1 674 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 OR52D1Q9H346 318 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 Q9N2J8 555 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 FGF21Q9NSA1 209 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 EFCAB10A6NFE3 127 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 IMPA2O14732 288 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 BET1O15155 118 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 TSPAN19P0C672 248 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 CSF2RBP32927 897 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 TGFBR2P37173 567 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 ZNF136P52737 540 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 SCAND1P57086 179 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 DCAF7P61962 342 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 MGAT2Q10469 447 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 PHF19Q5T6S3 580 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 SLX4IPQ5VYV7 408 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 GUSBP11Q6P575 273 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 CBLN3Q6UW01 205 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 NPSR1Q6W5P4 371 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 THSD4Q6ZMP0 1018 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 MED25Q71SY5 747 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 OAFQ86UD1 273 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 CYP4Z2PQ8N1L4 340 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 OR10H4Q8NGA5 316 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 OR5H6Q8NGV6 325 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 BPIFA2Q96DR5 249 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 HCAR1Q9BXC0 346 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 OR51B6Q9H340 312 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 FN3KQ9H479 309 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 HHATLQ9HCP6 504 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 KLHL1Q9NR64 748 aa9.93□□□□□ -0.82
NEDD9-201ENST00000379433 RPL36Q9Y3U8 105 aaKnown RBP9.93□□□□□ -0.82
NEDD9-201ENST00000379433 A0A1W2PPK0 400 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 CDHR4A6H8M9 788 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 TLCD2A6NGC4 264 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 RGS13O14921 159 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 GMDSO60547 372 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 CSO75390 466 aaKnown RBP9.92□□□□□ -0.82
NEDD9-201ENST00000379433 GABARAPO95166 117 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 PPP1R3DO95685 299 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 APOA1P02647 267 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 RPLP0P05388 317 aaKnown RBP9.92□□□□□ -0.82
NEDD9-201ENST00000379433 DBIP07108 87 aaKnown RBP9.92□□□□□ -0.82
NEDD9-201ENST00000379433 GTF2E2P29084 291 aaKnown RBP9.92□□□□□ -0.82
NEDD9-201ENST00000379433 FASLGP48023 281 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 MTNR1AP48039 350 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 ARRB1P49407 418 aaPredicted RBP9.92□□□□□ -0.82
NEDD9-201ENST00000379433 CDC34P49427 236 aaPredicted RBP9.92□□□□□ -0.82
NEDD9-201ENST00000379433 P2RY4P51582 365 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 NR0B1P51843 470 aaKnown RBP9.92□□□□□ -0.82
NEDD9-201ENST00000379433 GARNL3Q5VVW2 1013 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 C22orf42Q6IC83 251 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 RPUSD3Q6P087 351 aaKnown RBP9.92□□□□□ -0.82
NEDD9-201ENST00000379433 CDK20Q8IZL9 346 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 UBE2J2Q8N2K1 259 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 EID2Q8N6I1 236 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 SYT14Q8NB59 555 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 GNPDA2Q8TDQ7 276 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 CCDC74AQ96AQ1 378 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 YIPF6Q96EC8 236 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 FOXN4Q96NZ1 517 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 OR1F2PQ96R84 312 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 TNFRSF13CQ96RJ3 184 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 CD180Q99467 661 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 HDHD5Q9BXW7 423 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 ZNF350Q9GZX5 532 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 PMF1-BGLAPU3KQ54 211 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 IGHV1OR21-1A0A087WYE8 117 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 A0A1B0GWA3 101 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 TRAPPC13A5PLN9 417 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 C4orf47A7E2U8 309 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 C12orf71A8MTZ7 269 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 TBX1O43435 398 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 SCO2O43819 266 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 OPN1LWP04000 364 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 HBQ1P09105 142 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 STAG3L3P0CL85 134 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 CELP19835 753 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 OMPP47874 163 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms