RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 LRRC37A2A6NM11 1700 aa13.07□□□□□ -0.32
SHROOM1-203ENST00000378679 CSTBP04080 98 aaKnown RBP13.07□□□□□ -0.32
SHROOM1-203ENST00000378679 ADH7P40394 386 aa13.07□□□□□ -0.32
SHROOM1-203ENST00000378679 SLC1A3P43003 542 aa13.07□□□□□ -0.32
SHROOM1-203ENST00000378679 DAP3P51398 398 aaKnown RBP13.07□□□□□ -0.32
SHROOM1-203ENST00000378679 EPHA4P54764 986 aa13.07□□□□□ -0.32
SHROOM1-203ENST00000378679 CCL7P80098 99 aa13.07□□□□□ -0.32
SHROOM1-203ENST00000378679 AQP6Q13520 282 aa13.07□□□□□ -0.32
SHROOM1-203ENST00000378679 ZIC1Q15915 447 aa13.07□□□□□ -0.32
SHROOM1-203ENST00000378679 UBE3DQ7Z6J8 389 aa13.07□□□□□ -0.32
SHROOM1-203ENST00000378679 LRRC56Q8IYG6 542 aaPredicted RBP13.07□□□□□ -0.32
SHROOM1-203ENST00000378679 TMEM41AQ96HV5 264 aa13.07□□□□□ -0.32
SHROOM1-203ENST00000378679 Q96M85 177 aa13.07□□□□□ -0.32
SHROOM1-203ENST00000378679 OR2B2Q9GZK3 357 aa13.07□□□□□ -0.32
SHROOM1-203ENST00000378679 RANGRFQ9HD47 186 aaPredicted RBP13.07□□□□□ -0.32
SHROOM1-203ENST00000378679 MED11Q9P086 117 aa13.07□□□□□ -0.32
SHROOM1-203ENST00000378679 YARS2Q9Y2Z4 477 aaKnown RBP13.07□□□□□ -0.32
SHROOM1-203ENST00000378679 A6NIZ1 184 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 FBXO45P0C2W1 286 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 OR3A3P47888 321 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 OR3A2P47893 321 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 RAP1BP61224 184 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 RAP1AP62834 184 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 PLP2Q04941 152 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 ACSM3Q53FZ2 586 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 BTN2A1Q7KYR7 527 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 RPS19BP1Q86WX3 136 aaKnown RBP13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 OR5AK2Q8NH90 309 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 PGAM5Q96HS1 289 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 ANKRD10Q9NXR5 420 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 CLEC2DQ9UHP7 191 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 PCOLCE2Q9UKZ9 415 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 TRBV5-3A0A0A0MS03 114 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 PHYHO14832 338 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 MAGEA2P43356 314 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 FASLGP48023 281 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 GDI2P50395 445 aaKnown RBP13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 ZXDCQ2QGD7 858 aaPredicted RBP13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 QSOX2Q6ZRP7 698 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 OR4C15Q8NGM1 316 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 ZNF775Q96BV0 537 aaPredicted RBP13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 VWCEQ96DN2 955 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 CPNE5Q9HCH3 593 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 A0A1W2PS29 197 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 NPIPB8E9PQR5 432 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 CD14P08571 375 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 MAN2A2P49641 1150 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 POLR2HP52434 150 aaKnown RBP13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 SYT14P1Q58G82 188 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 NXNL2Q5VZ03 156 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 FAHD1Q6P587 224 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 PARP16Q8N5Y8 322 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 CENPOQ9BU64 300 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 CKAP5Q14008 2032 aa13.06□□□□□ -0.32
SHROOM1-203ENST00000378679 GJE1A6NN92 205 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 KDM4EB2RXH2 506 aaPredicted RBP13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 CRYZL1O95825 349 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 ZGLP1P0C6A0 271 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 GDF1P27539 372 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 LTBRP36941 435 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 ZNF181Q2M3W8 571 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 RAB11FIP2Q7L804 512 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 MISPQ8IVT2 679 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 KDM8Q8N371 416 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 PJA1Q8NG27 643 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 CCDC74BQ96LY2 380 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 BCL2L14Q9BZR8 327 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 GABARAPL1Q9H0R8 117 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 DUSP21Q9H596 190 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 GPN2Q9H9Y4 310 aaPredicted RBP13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 CTSFQ9UBX1 484 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 AK6Q9Y3D8 172 aaKnown RBP13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 ZNF208O43345 1280 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 IL7P13232 177 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 FOLR1P15328 257 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 CASP3P42574 277 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 SSR4P51571 173 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 C1QTNF12Q5T7M4 302 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 ZNF100Q8IYN0 542 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 ZNF511Q8NB15 262 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 GPR32P1Q8NGA4 272 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 ZNF431Q8TF32 576 aaPredicted RBP13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 C15orf40Q8WUR7 153 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 ALG12Q9BV10 488 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 PPIL3Q9H2H8 161 aaKnown RBP13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 ANKRD34BA5PLL1 514 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 ZAR1LA6NP61 321 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 ATP1B1P05026 303 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 PRKACBP22694 351 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 EIF2B1Q14232 305 aaKnown RBP13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 VASNQ6EMK4 673 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 C8orf82Q6P1X6 216 aaPredicted RBP13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 LACC1Q8IV20 430 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 OR2L13Q8N349 312 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 GALNT6Q8NCL4 622 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 SYT4Q9H2B2 425 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 SIRT3Q9NTG7 399 aaPredicted RBP13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 SIRT5Q9NXA8 310 aa13.05□□□□□ -0.32
SHROOM1-203ENST00000378679 TMEM72A0PK05 275 aa13.04□□□□□ -0.32
SHROOM1-203ENST00000378679 TMEM221A6NGB7 291 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 216.7 ms