RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 CDC6Q99741 560 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 OR10A5Q9H207 317 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 A4GALTQ9NPC4 353 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 ACER3Q9NUN7 267 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 LOC105369274A0A096LPK9 316 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 ZNF850A8MQ14 1090 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 DLSTP36957 453 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 SLC19A1P41440 591 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 EEF1A2Q05639 463 aaKnown RBP13.94□□□□□ -0.18
NPHP4-201ENST00000378156 KIAA1211LQ6NV74 962 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 OR4N4Q8N0Y3 316 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 IL17RCQ8NAC3 791 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 OR5H2Q8NGV7 314 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 UBE2J1Q9Y385 318 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-201ENST00000378156 DOCK5Q9H7D0 1870 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 EFCAB7A8K855 629 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 FTCDNL1E5RQL4 147 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 CTNSO60931 367 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 CSO75390 466 aaKnown RBP13.93□□□□□ -0.18
NPHP4-201ENST00000378156 SLC26A5P58743 744 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 FAM122CQ6P4D5 195 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 MEPCEQ7L2J0 689 aaKnown RBP13.93□□□□□ -0.18
NPHP4-201ENST00000378156 ESX1Q8N693 406 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 POC1BQ8TC44 478 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 ADAMTS14Q8WXS8 1223 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 SLC25A18Q9H1K4 315 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 TXNL4BQ9NX01 149 aaKnown RBP13.93□□□□□ -0.18
NPHP4-201ENST00000378156 A6NL46 340 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 GABRPO00591 440 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 SLC16A7O60669 478 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 RAB3DO95716 219 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 FBXO45P0C2W1 286 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 CHRNB1P11230 501 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 IDH3GP51553 393 aaPredicted RBP13.93□□□□□ -0.18
NPHP4-201ENST00000378156 RAP2BP61225 183 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 PTOV1Q86YD1 416 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 STK35Q8TDR2 534 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 ZFPM2Q8WW38 1151 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.93□□□□□ -0.18
NPHP4-201ENST00000378156 SLC6A5Q9Y345 797 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 XIRP1Q702N8 1843 aaKnown RBP13.93□□□□□ -0.18
NPHP4-201ENST00000378156 OR5K3A6NET4 321 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 KRBOX1C9JBD0 128 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 OPN1LWP04000 364 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 AQP2P41181 271 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 DCDP81605 110 aaKnown RBP13.93□□□□□ -0.18
NPHP4-201ENST00000378156 B4GALNT1Q00973 533 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 MC2RQ01718 297 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 POU4F3Q15319 338 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 TATDN3Q17R31 274 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 TRIM61Q5EBN2 209 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 SERPINA12Q8IW75 414 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 CELF2-AS1Q8N7Q2 184 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 OR13C2Q8NGS9 318 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 OR6C1Q96RD1 312 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 C19orf43Q9BQ61 176 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 ULBP3Q9BZM4 244 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 GAREM1Q9H706 876 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 GGT3PA6NGU5 568 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 SYT5O00445 386 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 IGFBP1P08833 259 aaPredicted RBP13.93□□□□□ -0.18
NPHP4-201ENST00000378156 SLC1A3P43003 542 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 CSNK2A1P68400 391 aaPredicted RBP13.93□□□□□ -0.18
NPHP4-201ENST00000378156 FOXK1P85037 733 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 ZNF417Q8TAU3 575 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 CORINQ9Y5Q5 1042 aa13.93□□□□□ -0.18
NPHP4-201ENST00000378156 SIGLEC6O43699 453 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 LCATP04180 440 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 CLEC2LP0C7M8 214 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 UBBP0CG47 229 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 UBCP0CG48 685 aaKnown RBP13.92□□□□□ -0.18
NPHP4-201ENST00000378156 ITGB8P26012 769 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 THBS2P35442 1172 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 SLC14A1Q13336 389 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 GPR157Q5UAW9 335 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 NKAIN2Q5VXU1 208 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 CFAP77Q6ZQR2 320 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 LRRC28Q86X40 367 aaPredicted RBP13.92□□□□□ -0.18
NPHP4-201ENST00000378156 LYSMD2Q8IV50 215 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 SLC16A11Q8NCK7 471 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 SPTSSAQ969W0 71 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 LMF1Q96S06 567 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 SPIN2AQ99865 258 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 SPIN2BQ9BPZ2 258 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 ACAD8Q9UKU7 415 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 BRWD1Q9NSI6 2320 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 SERINC4A6NH21 518 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 RAD1O60671 282 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 TMEM225BP0DP42 221 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 CASP3P42574 277 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 CASP6P55212 293 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 SLX4IPQ5VYV7 408 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 ZNF322Q6U7Q0 402 aaPredicted RBP13.92□□□□□ -0.18
NPHP4-201ENST00000378156 TMEM150AQ86TG1 271 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 SVBPQ8N300 66 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 DCUN1D4Q92564 292 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 MRGPRX1Q96LB2 322 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 ZNF587Q96SQ5 575 aaPredicted RBP13.92□□□□□ -0.18
NPHP4-201ENST00000378156 CEP290O15078 2479 aa13.92□□□□□ -0.18
NPHP4-201ENST00000378156 ARPC1BO15143 372 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms