RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 SMPD2O60906 423 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 KRT33AO76009 404 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 KRT34O76011 436 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 PLAUP00749 431 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 CD3EP07766 207 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 HTR2AP28223 471 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 H3F3AP84243 136 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 DMTNQ08495 405 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 RBBP4Q09028 425 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 SLC17A1Q14916 467 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 C20orf204Q6ZNR8 217 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 AAED1Q7RTV5 226 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 SNX32Q86XE0 403 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 P3H2Q8IVL5 708 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 OR52N5Q8NH56 324 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 VANGL1Q8TAA9 524 aaPredicted RBP10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 STK35Q8TDR2 534 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 AKAP1Q92667 903 aaKnown RBP eCLIP10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 SLC35B4Q969S0 331 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 MBD6Q96DN6 1003 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 KTI12Q96EK9 354 aaPredicted RBP10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 ECSITQ9BQ95 431 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 TRIM2Q9C040 744 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 ESRP2Q9H6T0 727 aaKnown RBP10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 SAR1AQ9NR31 198 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 BEX4Q9NWD9 120 aaPredicted RBP10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 PARPBPQ9NWS1 579 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 CAPN7Q9Y6W3 813 aa10.22□□□□□ -0.77
SMARCE1-203ENST00000377808 FREM1Q5H8C1 2179 aa10.21□□□□□ -0.77
SMARCE1-203ENST00000377808 A0A1W2PR80 420 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 BBIP1A8MTZ0 92 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 M0QX08 132 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 MFN2O95140 757 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 CNOT4O95628 575 aaKnown RBP10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 PNMTP11086 282 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 CD99P14209 185 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 CDH2P19022 906 aaPredicted RBP10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 COX5AP20674 150 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 LOXP28300 417 aaPredicted RBP10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 HOXC12P31275 282 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 NTF4P34130 210 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 PCGF2P35227 344 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 MDH1P40925 334 aaKnown RBP10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 OR1Q1Q15612 314 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 INTS11Q5TA45 600 aaKnown RBP10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 NIPAL3Q6P499 406 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 SLC30A8Q8IWU4 369 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 KDM8Q8N371 416 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 C10orf53Q8N6V4 93 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 ZNF433Q8N7K0 673 aaPredicted RBP10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 DNAJA4Q8WW22 397 aaPredicted RBP10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 SLC38A4Q969I6 547 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 PIGTQ969N2 578 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 LRRC58Q96CX6 371 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 SLC47A1Q96FL8 570 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 PERPQ96FX8 193 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 ZNF385AQ96PM9 386 aaKnown RBP10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 SH3GL1Q99961 368 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 USB1Q9BQ65 265 aaKnown RBP10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 SF3B5Q9BWJ5 86 aaKnown RBP10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 CXXC4Q9H2H0 198 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 KAT8Q9H7Z6 458 aaKnown RBP10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 TAS2R16Q9NYV7 291 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 ARMCX1Q9P291 453 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 KLHL14Q9P2G3 628 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 PRDM4Q9UKN5 801 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 RNF115Q9Y4L5 304 aa10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 HRNRQ86YZ3 2850 aaPredicted RBP10.21□□□□□ -0.78
SMARCE1-203ENST00000377808 TRAV36DV7A0A075B6V5 113 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 CPSF4LA6NMK7 179 aaKnown RBP10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 OR2T1O43869 369 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 NQO1P15559 274 aaKnown RBP10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 PCBP3P57721 371 aaKnown RBP10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 EGR4Q05215 589 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 BSPH1Q075Z2 132 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 C1DQ13901 141 aaKnown RBP10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 DUSP7Q16829 419 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 VMACQ2NL98 169 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 RABL3Q5HYI8 236 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 TIMM23BQ5SRD1 257 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 NCMAPQ5T1S8 102 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 TSPO2Q5TGU0 170 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 NANOGP8Q6NSW7 305 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 ADAM5Q6NVV9 412 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 ULK3Q6PHR2 472 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 PATL1Q86TB9 770 aaKnown RBP10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 TGIF2LYQ8IUE0 185 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 POU5F2Q8N7G0 328 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 LSMEM1Q8N8F7 131 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 PCYOX1LQ8NBM8 494 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 MFSD8Q8NHS3 518 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 TMEM45BQ96B21 275 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 MCHR1Q99705 422 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 WFDC6Q9BQY6 131 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 PTDSS2Q9BVG9 487 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 RSPO3Q9BXY4 272 aaPredicted RBP10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 FAM107BQ9H098 131 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 CCDC134Q9H6E4 229 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 NANOGQ9H9S0 305 aa10.2□□□□□ -0.78
SMARCE1-203ENST00000377808 C12orf10Q9HB07 376 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms