RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 ULK3Q6PHR2 472 aa11.87□□□□□ -0.51
USP11-204ENST00000377107 METAP1DQ6UB28 335 aaPredicted RBP11.87□□□□□ -0.51
USP11-204ENST00000377107 Q6ZS52 159 aa11.87□□□□□ -0.51
USP11-204ENST00000377107 MS4A15Q8N5U1 240 aa11.87□□□□□ -0.51
USP11-204ENST00000377107 ZDHHC1Q8WTX9 485 aa11.87□□□□□ -0.51
USP11-204ENST00000377107 SEMA4CQ9C0C4 833 aa11.87□□□□□ -0.51
USP11-204ENST00000377107 OR51J1Q9H342 316 aa11.87□□□□□ -0.51
USP11-204ENST00000377107 SLA2Q9H6Q3 261 aa11.87□□□□□ -0.51
USP11-204ENST00000377107 SLC23A1Q9UHI7 598 aa11.87□□□□□ -0.51
USP11-204ENST00000377107 OR6C68A6NDL8 312 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 RGS13O14921 159 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 ZNF780AO75290 641 aaPredicted RBP11.86□□□□□ -0.51
USP11-204ENST00000377107 NRG3P56975 720 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 FOXL2P58012 376 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 OC90Q02509 493 aaPredicted RBP11.86□□□□□ -0.51
USP11-204ENST00000377107 NKAIN2Q5VXU1 208 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 OR5M10Q6IEU7 315 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 TMPRSS11FQ6ZWK6 438 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 FAM220AQ7Z4H9 259 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 ZNF676Q8N7Q3 588 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 FAM181AQ8N9Y4 354 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 C16orf52Q8NHV5 167 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 GIMAP1Q8WWP7 306 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 MARVELD1Q9BSK0 173 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 DZANK1Q9NVP4 752 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 DNAJB12Q9NXW2 375 aaKnown RBP11.86□□□□□ -0.51
USP11-204ENST00000377107 CD207Q9UJ71 328 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 GATBO75879 557 aaKnown RBP11.86□□□□□ -0.51
USP11-204ENST00000377107 RLN1P04808 185 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 H2AFB2P0C5Z0 115 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 BIKQ13323 160 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 RPL13AP3Q6NVV1 102 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 CBLN3Q6UW01 205 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 TTLL10Q6ZVT0 673 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 TMPRSS12Q86WS5 348 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 CEP76Q8TAP6 659 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 LMX1AQ8TE12 382 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 THAP3Q8WTV1 239 aaPredicted RBP11.86□□□□□ -0.51
USP11-204ENST00000377107 ELSPBP1Q96BH3 223 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 TIMP4Q99727 224 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 MRPL39Q9NYK5 338 aaKnown RBP11.86□□□□□ -0.51
USP11-204ENST00000377107 KLK11Q9UBX7 282 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 PPIEQ9UNP9 301 aaKnown RBP11.86□□□□□ -0.51
USP11-204ENST00000377107 KIF26AQ9ULI4 1882 aaPredicted RBP11.86□□□□□ -0.51
USP11-204ENST00000377107 HIST1H2ABP04908 130 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 NPR2P20594 1047 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 CFL1P23528 166 aaKnown RBP11.86□□□□□ -0.51
USP11-204ENST00000377107 ACTC1P68032 377 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 ACTA1P68133 377 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 YIF1BQ5BJH7 314 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 ZNF613Q6PF04 617 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 HIST3H2AQ7L7L0 130 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 SIX5Q8N196 739 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 ZFAND1Q8TCF1 268 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 HIST1H2ACQ93077 130 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 TM4SF19Q96DZ7 209 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 C14orf105Q9NVL8 296 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 NCDNQ9UBB6 729 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 HEATR5AQ86XA9 2040 aa11.86□□□□□ -0.51
USP11-204ENST00000377107 MPDZO75970 2070 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 HCRTR2O43614 444 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 PLPP2O43688 288 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 SLC35E2P0CK97 266 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 GDNFP39905 211 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 KIAA1024LP59773 190 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 GAS6Q14393 721 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 POU4F3Q15319 338 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 CEBPEQ15744 281 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 SLC35D2Q76EJ3 337 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 RNF170Q96K19 258 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 LYRM4Q9HD34 91 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 MSRAQ9UJ68 235 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 ERVH48-1M5A8F1 160 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 FMO6PO60774 539 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 SERPINA3P01011 423 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 WNT1P04628 370 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 EPXP11678 715 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 IGFBP4P22692 258 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 RBMS1P29558 406 aaKnown RBP11.85□□□□□ -0.51
USP11-204ENST00000377107 RAB38P57729 211 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 PLAURQ03405 335 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 MED25Q71SY5 747 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 ZNF550Q7Z398 422 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 CMTM4Q8IZR5 234 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 SLC22A18ASQ8N1D0 253 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 ZNF527Q8NB42 609 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 DUSP18Q8NEJ0 188 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 OR2T35Q8NGX2 323 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 FLVCR1-AS1Q8TAF5 88 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 ALG12Q9BV10 488 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 OR10A5Q9H207 317 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 DHCR7Q9UBM7 475 aaKnown RBP11.85□□□□□ -0.51
USP11-204ENST00000377107 KLHL21Q9UJP4 597 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 SLC6A5Q9Y345 797 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 SPAG17Q6Q759 2223 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 ABCA7Q8IZY2 2146 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 TRABD2BA6NFA1 517 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 C17orf105B2RV13 164 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 TEX46H3BTG2 121 aa11.85□□□□□ -0.51
USP11-204ENST00000377107 C1QBP02746 253 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms