RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 HMGB4Q8WW32 186 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 PATE1Q8WXA2 126 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 ANKRD9Q96BM1 317 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-202ENST00000376839 CCDC120Q96HB5 630 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 RBP7Q96R05 134 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 RBCK1Q9BYM8 510 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 ZNF436Q9C0F3 470 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-202ENST00000376839 OR10A4Q9H209 315 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 CD93Q9NPY3 652 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 RPS6KB2Q9UBS0 482 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 ENTPD2Q9Y5L3 495 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 LOC105371267A0A1B0GV96 52 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 FAM171A2A8MVW0 826 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 C5orf67F2Z3F1 127 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 I3L521 148 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 NDUFB2O95178 105 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 RASGRP1O95267 797 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 RBM34P42696 430 aaKnown RBP12.13□□□□□ -0.47
ACTN1-202ENST00000376839 PUDPQ08623 228 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 UNQ9370/PRO34162Q6UXP9 181 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 FCRLAQ7L513 359 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 SFTPA2Q8IWL1 248 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 CA13Q8N1Q1 262 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 RGP1Q92546 391 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-202ENST00000376839 RERGQ96A58 199 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-202ENST00000376839 HSPA12BQ96MM6 686 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 MYADMQ96S97 322 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 MFRPQ9BY79 579 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 PRDM9Q9NQV7 894 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 KLK11Q9UBX7 282 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 ZNF346Q9UL40 294 aaKnown RBP12.13□□□□□ -0.47
ACTN1-202ENST00000376839 NPTNQ9Y639 398 aa12.13□□□□□ -0.47
ACTN1-202ENST00000376839 SPTBP11277 2137 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 OR6C68A6NDL8 312 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 HRKO00198 91 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 HCRTR1O43613 425 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 SERPINI2O75830 405 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 RPL4P36578 427 aaKnown RBP12.12□□□□□ -0.47
ACTN1-202ENST00000376839 KIR2DL1P43626 348 aaPredicted RBP12.12□□□□□ -0.47
ACTN1-202ENST00000376839 NANOS3P60323 173 aaKnown RBP12.12□□□□□ -0.47
ACTN1-202ENST00000376839 RPS15P62841 145 aaKnown RBP12.12□□□□□ -0.47
ACTN1-202ENST00000376839 IKZF1Q13422 519 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 PON3Q15166 354 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 WDR45BQ5MNZ6 344 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 FAAP20Q6NZ36 180 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 SEZ6L2Q6UXD5 910 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 COMMD7Q86VX2 200 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 SIX5Q8N196 739 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 NPEPL1Q8NDH3 523 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 OR2T4Q8NH00 348 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 RASD2Q96D21 266 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 CHIAQ9BZP6 476 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 TRIM2Q9C040 744 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 ACTR6Q9GZN1 396 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 OBP2AQ9NY56 170 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 GDE1Q9NZC3 331 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 DTX4Q9Y2E6 619 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 TP53BP1Q12888 1972 aaPredicted RBP12.12□□□□□ -0.47
ACTN1-202ENST00000376839 A0A1B0GVT2 93 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 A6NCN8 305 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 IFITM5A6NNB3 132 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 GRXCR1A8MXD5 290 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 K7EQS6 105 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 KHNYNO15037 678 aaKnown RBP12.12□□□□□ -0.47
ACTN1-202ENST00000376839 CTSBP07858 339 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 SPI1P17947 270 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 DPP4P27487 766 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 DIO1P49895 249 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 BLVRAP53004 296 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 GAS6Q14393 721 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 LINC00114Q6XXX2 140 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 YAF2Q8IY57 180 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 FTMTQ8N4E7 242 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 LRRC20Q8TCA0 184 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 MARVELD3Q96A59 401 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 DDOQ99489 341 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 SEC22CQ9BRL7 303 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 CLEC4MQ9H2X3 399 aaPredicted RBP12.12□□□□□ -0.47
ACTN1-202ENST00000376839 SPACA6W5XKT8 324 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 DOCK8Q8NF50 2099 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 TICRRQ7Z2Z1 1910 aa12.12□□□□□ -0.47
ACTN1-202ENST00000376839 ARPC1BO15143 372 aaKnown RBP12.11□□□□□ -0.47
ACTN1-202ENST00000376839 GALR3O60755 368 aaPredicted RBP12.11□□□□□ -0.47
ACTN1-202ENST00000376839 RDH16O75452 317 aa12.11□□□□□ -0.47
ACTN1-202ENST00000376839 HRGP04196 525 aa12.11□□□□□ -0.47
ACTN1-202ENST00000376839 GDI1P31150 447 aa12.11□□□□□ -0.47
ACTN1-202ENST00000376839 NNATQ16517 81 aa12.11□□□□□ -0.47
ACTN1-202ENST00000376839 TMEM196Q5HYL7 178 aa12.11□□□□□ -0.47
ACTN1-202ENST00000376839 GRAMD2AQ8IUY3 354 aa12.11□□□□□ -0.47
ACTN1-202ENST00000376839 LSMEM1Q8N8F7 131 aa12.11□□□□□ -0.47
ACTN1-202ENST00000376839 RNF166Q96A37 237 aaPredicted RBP12.11□□□□□ -0.47
ACTN1-202ENST00000376839 CLIP3Q96DZ5 547 aa12.11□□□□□ -0.47
ACTN1-202ENST00000376839 SGTBQ96EQ0 304 aa12.11□□□□□ -0.47
ACTN1-202ENST00000376839 RPP25Q9BUL9 199 aaKnown RBP12.11□□□□□ -0.47
ACTN1-202ENST00000376839 TSPAN10Q9H1Z9 355 aaPredicted RBP12.11□□□□□ -0.47
ACTN1-202ENST00000376839 FKRPQ9H9S5 495 aa12.11□□□□□ -0.47
ACTN1-202ENST00000376839 LIN7BQ9HAP6 207 aa12.11□□□□□ -0.47
ACTN1-202ENST00000376839 POLE3Q9NRF9 147 aa12.11□□□□□ -0.47
ACTN1-202ENST00000376839 PCOLCE2Q9UKZ9 415 aa12.11□□□□□ -0.47
ACTN1-202ENST00000376839 EML5Q05BV3 1969 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms