RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 PDLIM1O00151 329 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 SSX4O60224 188 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 AKR7A3O95154 331 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 HOXB9P17482 250 aaPredicted RBP18.47■□□□□ 0.55
VSX1-201ENST00000376707 IDH3AP50213 366 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 LARS2Q15031 903 aaKnown RBP18.47■□□□□ 0.55
VSX1-201ENST00000376707 ZSWIM7Q19AV6 140 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 TTMPQ5BVD1 217 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 C6orf10Q5SRN2 563 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 RNF220Q5VTB9 566 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 WBP2NLQ6ICG8 309 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 FBXL14Q8N1E6 418 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 TMEM99Q8N816 258 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 C1orf162Q8NEQ5 155 aaPredicted RBP18.47■□□□□ 0.55
VSX1-201ENST00000376707 OR9K2Q8NGE7 335 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 TMEM45BQ96B21 275 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 TAPBPLQ9BX59 468 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 AMBRA1Q9C0C7 1298 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 PAIP1Q9H074 479 aaKnown RBP18.47■□□□□ 0.55
VSX1-201ENST00000376707 SLC17A5Q9NRA2 495 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 CBLN4Q9NTU7 201 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 ZNF443Q9Y2A4 671 aaPredicted RBP18.47■□□□□ 0.55
VSX1-201ENST00000376707 AMDHD2Q9Y303 409 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 PCDHB14Q9Y5E9 798 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 CADP27708 2225 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 POLR3GO15318 223 aaPredicted RBP18.46■□□□□ 0.55
VSX1-201ENST00000376707 CRLF1O75462 422 aa18.46■□□□□ 0.55
VSX1-201ENST00000376707 BMP2P12643 396 aa18.46■□□□□ 0.55
VSX1-201ENST00000376707 NCF2P19878 526 aaPredicted RBP18.46■□□□□ 0.55
VSX1-201ENST00000376707 ACAA2P42765 397 aaKnown RBP18.46■□□□□ 0.55
VSX1-201ENST00000376707 FABP6P51161 128 aa18.46■□□□□ 0.55
VSX1-201ENST00000376707 NUDT6P53370 316 aa18.46■□□□□ 0.55
VSX1-201ENST00000376707 RPS26P11Q5JNZ5 115 aaPredicted RBP18.46■□□□□ 0.55
VSX1-201ENST00000376707 DNM1P46Q6ZS02 220 aa18.46■□□□□ 0.55
VSX1-201ENST00000376707 AAED1Q7RTV5 226 aa18.46■□□□□ 0.55
VSX1-201ENST00000376707 GPAT4Q86UL3 456 aa18.46■□□□□ 0.55
VSX1-201ENST00000376707 MUC15Q8N387 334 aa18.46■□□□□ 0.55
VSX1-201ENST00000376707 WDR31Q8NA23 367 aa18.46■□□□□ 0.55
VSX1-201ENST00000376707 TMEM19Q96HH6 336 aa18.46■□□□□ 0.55
VSX1-201ENST00000376707 RHNO1Q9BSD3 238 aa18.46■□□□□ 0.55
VSX1-201ENST00000376707 CCDC28BQ9BUN5 200 aa18.46■□□□□ 0.55
VSX1-201ENST00000376707 SF3B5Q9BWJ5 86 aaKnown RBP18.46■□□□□ 0.55
VSX1-201ENST00000376707 ARMC7Q9H6L4 198 aa18.46■□□□□ 0.55
VSX1-201ENST00000376707 ZNF232Q9UNY5 417 aa18.46■□□□□ 0.55
VSX1-201ENST00000376707 A0A0G2JPF8 293 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 AQP7P3A6NL99 342 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 A8MVM7 634 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 HNRNPCL2B2RXH8 293 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 HNRNPCL3B7ZW38 293 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 HNRNPCL1O60812 293 aaKnown RBP18.45■□□□□ 0.54
VSX1-201ENST00000376707 HNRNPCL4P0DMR1 293 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 MPGP29372 298 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 STX1BP61266 288 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 IRX1P78414 480 aaPredicted RBP18.45■□□□□ 0.54
VSX1-201ENST00000376707 BNIP2Q12982 314 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 FADDQ13158 208 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 RGNQ15493 299 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 PRAMEF8Q5VWM4 474 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 PRAMEF7Q5VXH5 474 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 TMEM225Q6GV28 225 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 C11orf71Q6IPW1 123 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 SLC2A7Q6PXP3 512 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 BLOC1S3Q6QNY0 202 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 KLHL24Q6TFL4 600 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 B3GLCTQ6Y288 498 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 FUNDC1Q8IVP5 155 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 POMGNT2Q8NAT1 580 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 ZNF385AQ96PM9 386 aaKnown RBP18.45■□□□□ 0.54
VSX1-201ENST00000376707 EBF4Q9BQW3 602 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 RAD21L1Q9H4I0 556 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 FKRPQ9H9S5 495 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 BCL2L10Q9HD36 194 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 TMEM45AQ9NWC5 275 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 ADPRHL2Q9NX46 363 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 ADAM21Q9UKJ8 722 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 ATP23Q9Y6H3 246 aa18.45■□□□□ 0.54
VSX1-201ENST00000376707 A0A096LPI6 279 aa18.44■□□□□ 0.54
VSX1-201ENST00000376707 CLIC1O00299 241 aa18.44■□□□□ 0.54
VSX1-201ENST00000376707 KRT33AO76009 404 aa18.44■□□□□ 0.54
VSX1-201ENST00000376707 CDH2P19022 906 aaPredicted RBP18.44■□□□□ 0.54
VSX1-201ENST00000376707 PRPS1P60891 318 aa18.44■□□□□ 0.54
VSX1-201ENST00000376707 RAB35Q15286 201 aa18.44■□□□□ 0.54
VSX1-201ENST00000376707 LRIF1Q5T3J3 769 aa18.44■□□□□ 0.54
VSX1-201ENST00000376707 C1QTNF12Q5T7M4 302 aa18.44■□□□□ 0.54
VSX1-201ENST00000376707 ZNF544Q6NX49 715 aa18.44■□□□□ 0.54
VSX1-201ENST00000376707 ABHD12BQ7Z5M8 362 aaPredicted RBP18.44■□□□□ 0.54
VSX1-201ENST00000376707 CLIP4Q8N3C7 705 aa18.44■□□□□ 0.54
VSX1-201ENST00000376707 ZIC4Q8N9L1 334 aa18.44■□□□□ 0.54
VSX1-201ENST00000376707 SPATA9Q9BWV2 254 aa18.44■□□□□ 0.54
VSX1-201ENST00000376707 PIF1Q9H611 641 aa18.44■□□□□ 0.54
VSX1-201ENST00000376707 A4GALTQ9NPC4 353 aa18.44■□□□□ 0.54
VSX1-201ENST00000376707 SLC52A3Q9NQ40 469 aa18.44■□□□□ 0.54
VSX1-201ENST00000376707 CHST2Q9Y4C5 530 aa18.44■□□□□ 0.54
VSX1-201ENST00000376707 GMEB1Q9Y692 573 aa18.44■□□□□ 0.54
VSX1-201ENST00000376707 WNT11O96014 354 aa18.43■□□□□ 0.54
VSX1-201ENST00000376707 PRG2P13727 222 aa18.43■□□□□ 0.54
VSX1-201ENST00000376707 SLC25A3Q00325 362 aa18.43■□□□□ 0.54
VSX1-201ENST00000376707 C1orf140Q5VVS0 124 aa18.43■□□□□ 0.54
VSX1-201ENST00000376707 CLEC2AQ6UVW9 174 aa18.43■□□□□ 0.54
VSX1-201ENST00000376707 GOLGA6L1Q8N7Z2 621 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms