RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 RTL4Q6ZR62 310 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 OOSP2Q86WS3 158 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 SLITRK4Q8IW52 837 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 SDR9C7Q8NEX9 313 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 ZNF721Q8TF20 911 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 RIT1Q92963 219 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 NDC1Q9BTX1 674 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 RBCK1Q9BYM8 510 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 RASD1Q9Y272 281 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 DAPL1A0PJW8 107 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 PRAMEF2O60811 474 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 OR2T7P0C7T2 308 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 THEGLP0DJG4 465 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 NME1P15531 152 aaKnown RBP8.75□□□□□ -1.01
TRIM39-202ENST00000376659 ZNF3P17036 446 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 DPP4P27487 766 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 EVI2BP34910 448 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 ZNF74Q16587 644 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 OGFOD3Q6PK18 319 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 NOXA1Q86UR1 476 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 PARGQ86W56 976 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 TIGD4Q8IY51 512 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 ZNF655Q8N720 491 aaPredicted RBP8.75□□□□□ -1.01
TRIM39-202ENST00000376659 OR2T27Q8NH04 317 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 OR51A7Q8NH64 312 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 ZFAND1Q8TCF1 268 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 RNF138Q8WVD3 245 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 GHSRQ92847 366 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 MOGAT1Q96PD6 335 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 CCNL2Q96S94 520 aaPredicted RBP8.75□□□□□ -1.01
TRIM39-202ENST00000376659 WACQ9BTA9 647 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 OR10A5Q9H207 317 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 KCNN2Q9H2S1 579 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 ZNF275Q9NSD4 429 aaPredicted RBP8.75□□□□□ -1.01
TRIM39-202ENST00000376659 MALT1Q9UDY8 824 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 NPFFR2Q9Y5X5 522 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 MAU2Q9Y6X3 613 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 IGHV5-51A0A0C4DH38 117 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 TRBV5-5A0A0J9YX44 114 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 ANKRD34CP0C6C1 535 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 TYRP1P17643 537 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 F8A1P23610 371 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 SLC6A6P31641 620 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 CDKN2AP42771 156 aaKnown RBP8.75□□□□□ -1.01
TRIM39-202ENST00000376659 SLC25A1P53007 311 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 BTG1P62324 171 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 BIVMQ86UB2 503 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 CDC20BQ86Y33 519 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 MOSPD2Q8NHP6 518 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 THAP4Q8WY91 577 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 TCTN2Q96GX1 697 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 CMTM3Q96MX0 182 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 IER2Q9BTL4 223 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 RERGLQ9H628 205 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 ZFP64Q9NPA5 681 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 SLC2A4RGQ9NR83 387 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 RHBDD3Q9Y3P4 386 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 MTCH2Q9Y6C9 303 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 PHF3Q92576 2039 aaKnown RBP8.75□□□□□ -1.01
TRIM39-202ENST00000376659 A0A0B4J203 849 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 SELENOFO60613 162 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 SRPX2O60687 465 aaPredicted RBP8.75□□□□□ -1.01
TRIM39-202ENST00000376659 IL33O95760 270 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 POU3F3P20264 500 aaPredicted RBP8.75□□□□□ -1.01
TRIM39-202ENST00000376659 CRYZQ08257 329 aaKnown RBP8.75□□□□□ -1.01
TRIM39-202ENST00000376659 SYT13Q7L8C5 426 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 OVCH1Q7RTY7 1134 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 OR10H4Q8NGA5 316 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 ADAMTS18Q8TE60 1221 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 MAP3K3Q99759 626 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 PTDSS2Q9BVG9 487 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 NCDNQ9UBB6 729 aa8.75□□□□□ -1.01
TRIM39-202ENST00000376659 DCTN6O00399 190 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 NDUFB2O95178 105 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 C1QBP02746 253 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 APEHP13798 732 aaKnown RBP8.74□□□□□ -1.01
TRIM39-202ENST00000376659 ARSBP15848 533 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 MNDAP41218 407 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 DLX5P56178 289 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 HSD17B7P56937 341 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 ERV3-1Q14264 604 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 MESTQ5EB52 335 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 TMEM255AQ5JRV8 349 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 HACD4Q5VWC8 232 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 LRRTM1Q86UE6 522 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 WDFY1Q8IWB7 410 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 SLC35F2Q8IXU6 374 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 FAM98AQ8NCA5 519 aaKnown RBP8.74□□□□□ -1.01
TRIM39-202ENST00000376659 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.74□□□□□ -1.01
TRIM39-202ENST00000376659 EXTL2Q9UBQ6 330 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 ZNF346Q9UL40 294 aaKnown RBP8.74□□□□□ -1.01
TRIM39-202ENST00000376659 FAM86C2PA6NEL3 165 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 C17orf51A8MQB3 221 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 IDSB3KWA1 339 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 H0YIG0 161 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 GIMD1P0DJR0 217 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 RNH1P13489 461 aaKnown RBP8.74□□□□□ -1.01
TRIM39-202ENST00000376659 GALK2Q01415 458 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 MADCAM1Q13477 382 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 GXYLT1Q4G148 440 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms