RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 VLDLRP98155 873 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 PDCD4Q53EL6 469 aaKnown RBP12.94□□□□□ -0.34
HDAC6-204ENST00000376643 C5orf46Q6UWT4 87 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 OR9K2Q8NGE7 335 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 OR52E4Q8NGH9 312 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 OR52P1PQ8NH57 321 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 ITCHQ96J02 903 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 SLC7A10Q9NS82 523 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 PNPOQ9NVS9 261 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 ZIM2Q9NZV7 527 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 ADAM21Q9UKJ8 722 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 RASD1Q9Y272 281 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 IFT52Q9Y366 437 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 GPR45Q9Y5Y3 372 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 ZANQ9Y493 2812 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 A0A0G2JPF8 293 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 PRAMEF27A3QJZ7 478 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 HNRNPCL2B2RXH8 293 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 HNRNPCL3B7ZW38 293 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 NDUFS8O00217 210 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 AKAP8O43823 692 aaKnown RBP12.93□□□□□ -0.34
HDAC6-204ENST00000376643 HNRNPCL1O60812 293 aaKnown RBP12.93□□□□□ -0.34
HDAC6-204ENST00000376643 NDUFS7O75251 213 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 AHSA1O95433 338 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 ALDOCP09972 364 aaKnown RBP12.93□□□□□ -0.34
HDAC6-204ENST00000376643 HNRNPCL4P0DMR1 293 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 HOXB1P14653 301 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-204ENST00000376643 CRATP43155 626 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 DSTNP60981 165 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 SNRPD2P62316 118 aaKnown RBP12.93□□□□□ -0.34
HDAC6-204ENST00000376643 CEACAM7Q14002 265 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 OR7A5Q15622 319 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 TMEM249Q2WGJ8 235 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 C3orf36Q3SXR2 165 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 TNFAIP8L3Q5GJ75 292 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 TSPO2Q5TGU0 170 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 PRAMEF8Q5VWM4 474 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 PRAMEF7Q5VXH5 474 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 NXNQ6DKJ4 435 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 GPAT4Q86UL3 456 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 CADM2Q8N3J6 435 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 STK35Q8TDR2 534 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 TMEM158Q8WZ71 300 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 NKIRAS1Q9NYS0 192 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 ABCA1O95477 2261 aa12.93□□□□□ -0.34
HDAC6-204ENST00000376643 DSPPQ9NZW4 1301 aa12.92□□□□□ -0.34
HDAC6-204ENST00000376643 IGHV4-30-2A0A087WSY4 118 aa12.92□□□□□ -0.34
HDAC6-204ENST00000376643 A0A1W2PR80 420 aa12.92□□□□□ -0.34
HDAC6-204ENST00000376643 PDE5AO76074 875 aa12.92□□□□□ -0.34
HDAC6-204ENST00000376643 CRYAAP02489 173 aa12.92□□□□□ -0.34
HDAC6-204ENST00000376643 ERCC1P07992 297 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-204ENST00000376643 FAM157CP0CG43 387 aa12.92□□□□□ -0.34
HDAC6-204ENST00000376643 SLC18A1P54219 525 aa12.92□□□□□ -0.34
HDAC6-204ENST00000376643 PLAURQ03405 335 aa12.92□□□□□ -0.34
HDAC6-204ENST00000376643 C6orf52Q5T4I8 152 aa12.92□□□□□ -0.34
HDAC6-204ENST00000376643 HMGN2P46Q86SG4 172 aa12.92□□□□□ -0.34
HDAC6-204ENST00000376643 ANKRD42Q8N9B4 389 aa12.92□□□□□ -0.34
HDAC6-204ENST00000376643 WDR31Q8NA23 367 aa12.92□□□□□ -0.34
HDAC6-204ENST00000376643 ANKK1Q8NFD2 765 aa12.92□□□□□ -0.34
HDAC6-204ENST00000376643 PNPT1Q8TCS8 783 aaKnown RBP12.92□□□□□ -0.34
HDAC6-204ENST00000376643 DNAJA3Q96EY1 480 aa12.92□□□□□ -0.34
HDAC6-204ENST00000376643 TEX37Q96LM6 180 aa12.92□□□□□ -0.34
HDAC6-204ENST00000376643 KATNB1Q9BVA0 655 aa12.92□□□□□ -0.34
HDAC6-204ENST00000376643 REPIN1Q9BWE0 567 aaKnown RBP12.92□□□□□ -0.34
HDAC6-204ENST00000376643 SPATA9Q9BWV2 254 aa12.92□□□□□ -0.34
HDAC6-204ENST00000376643 PARD6BQ9BYG5 372 aa12.92□□□□□ -0.34
HDAC6-204ENST00000376643 TPT1P8Q9HAU6 139 aa12.92□□□□□ -0.34
HDAC6-204ENST00000376643 ZNF443Q9Y2A4 671 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-204ENST00000376643 RNF212BA8MTL3 300 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 OR2T1O43869 369 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 AKR7A3O95154 331 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 F12P00748 615 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-204ENST00000376643 BCHEP06276 602 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 GSNP06396 782 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 TFPTP0C1Z6 253 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 USF1P22415 310 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-204ENST00000376643 EPHA3P29320 983 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 NTF4P34130 210 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 CDKN2CP42773 168 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 GZMKP49863 264 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 PDLIM4P50479 330 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 SPOCK1Q08629 439 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 FADDQ13158 208 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 COX20Q5RI15 118 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 C6orf10Q5SRN2 563 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 C9orf135Q5VTT2 229 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 C1orf140Q5VVS0 124 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 CYB5R2Q6BCY4 276 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 B3GLCTQ6Y288 498 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 ZNF836Q6ZNA1 936 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 TMEM99Q8N816 258 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 FAM169BQ8N8A8 192 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 ZNF540Q8NDQ6 660 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 MFSD8Q8NHS3 518 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 MAGEE2Q8TD90 523 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-204ENST00000376643 SLC38A2Q96QD8 506 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 PIMREGQ9BSJ6 248 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 SDR39U1Q9NRG7 319 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-204ENST00000376643 ADPRHL2Q9NX46 363 aa12.91□□□□□ -0.34
HDAC6-204ENST00000376643 RPS6KB2Q9UBS0 482 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms