RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ELF5Q9UKW6 265 aaPredicted RBP13.34□□□□□ -0.27
MSH5-201ENST00000375703 OR6C68A6NDL8 312 aa13.33□□□□□ -0.27
MSH5-201ENST00000375703 LEUTXA8MZ59 168 aa13.33□□□□□ -0.27
MSH5-201ENST00000375703 GPRIN2O60269 458 aa13.33□□□□□ -0.27
MSH5-201ENST00000375703 GUSBP08236 651 aa13.33□□□□□ -0.27
MSH5-201ENST00000375703 SPI1P17947 270 aa13.33□□□□□ -0.27
MSH5-201ENST00000375703 POU3F3P20264 500 aaPredicted RBP13.33□□□□□ -0.27
MSH5-201ENST00000375703 PPP1CAP62136 330 aa13.33□□□□□ -0.27
MSH5-201ENST00000375703 ZNF141Q15928 474 aa13.33□□□□□ -0.27
MSH5-201ENST00000375703 NDUFAF6Q330K2 333 aa13.33□□□□□ -0.27
MSH5-201ENST00000375703 GXYLT1Q4G148 440 aa13.33□□□□□ -0.27
MSH5-201ENST00000375703 SFRP4Q6FHJ7 346 aaPredicted RBP13.33□□□□□ -0.27
MSH5-201ENST00000375703 FBXO46Q6PJ61 603 aaPredicted RBP13.33□□□□□ -0.27
MSH5-201ENST00000375703 KIAA1324Q6UXG2 1013 aaKnown RBP13.33□□□□□ -0.27
MSH5-201ENST00000375703 ELMOD2Q8IZ81 293 aa13.33□□□□□ -0.27
MSH5-201ENST00000375703 ZNF433Q8N7K0 673 aaPredicted RBP13.33□□□□□ -0.27
MSH5-201ENST00000375703 ZNF680Q8NEM1 530 aa13.33□□□□□ -0.27
MSH5-201ENST00000375703 PHYHIPQ92561 330 aa13.33□□□□□ -0.27
MSH5-201ENST00000375703 SPACA7Q96KW9 195 aa13.33□□□□□ -0.27
MSH5-201ENST00000375703 DTX4Q9Y2E6 619 aa13.33□□□□□ -0.27
MSH5-201ENST00000375703 A0A087WUJ7 227 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 IDSB3KWA1 339 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 PSMD9O00233 223 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 PIN1P1O15428 100 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 PPM1BO75688 479 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 SLC22A5O76082 557 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 RAF1P04049 648 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 CTSBP07858 339 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 ADRB1P08588 477 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 ERVK-25P63136 954 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 STX4Q12846 297 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 ZSWIM7Q19AV6 140 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 DEFB110Q30KQ9 67 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 SLC35D3Q5M8T2 416 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 Q6ZSR6 202 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 ZNF761Q86XN6 746 aaPredicted RBP13.33□□□□□ -0.28
MSH5-201ENST00000375703 OR8H3Q8N146 312 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 ZNF527Q8NB42 609 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 MRGPRX1Q96LB2 322 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 SPRTNQ9H040 489 aaPredicted RBP13.33□□□□□ -0.28
MSH5-201ENST00000375703 FAM60AQ9NP50 221 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 POT1Q9NUX5 634 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 C2orf42Q9NWW7 574 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 MEIKINA0A087WXM9 373 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 A0A1B0GVI7 797 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 ZNF593O00488 134 aaPredicted RBP13.33□□□□□ -0.28
MSH5-201ENST00000375703 PDCD5O14737 125 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 CSTAP01040 98 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 TPOP07202 933 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 SULT1A3P0DMM9 295 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 SULT1A4P0DMN0 295 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 TFF2Q03403 129 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 CAMK2DQ13557 499 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 OR6C4Q8NGE1 309 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 ZPLD1Q8TCW7 415 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 RASD2Q96D21 266 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 VSTM2LQ96N03 204 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 DDOQ99489 341 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 LRIT1Q9P2V4 623 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 RABL2BQ9UNT1 228 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 ZNF281Q9Y2X9 895 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 ZNF337Q9Y3M9 751 aa13.33□□□□□ -0.28
MSH5-201ENST00000375703 ACOD1A6NK06 481 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 IFITM5A6NNB3 132 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 EFCAB7A8K855 629 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 ARPC3O15145 178 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 LINC01565O15544 149 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 CDC123O75794 336 aaPredicted RBP13.32□□□□□ -0.28
MSH5-201ENST00000375703 TNFP01375 233 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 MAGEB1P43366 347 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 YPEL5P62699 121 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 ZNF267Q14586 743 aaPredicted RBP13.32□□□□□ -0.28
MSH5-201ENST00000375703 NNATQ16517 81 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 FAM199XQ6PEV8 388 aaPredicted RBP13.32□□□□□ -0.28
MSH5-201ENST00000375703 NPSR1Q6W5P4 371 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 FCRLAQ7L513 359 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 FGD2Q7Z6J4 655 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 OOSP2Q86WS3 158 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 PIAS4Q8N2W9 510 aaPredicted RBP13.32□□□□□ -0.28
MSH5-201ENST00000375703 OR4C3Q8NH37 302 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 G6PC3Q9BUM1 346 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 SLC25A18Q9H1K4 315 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 C20orf85Q9H1P6 137 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 Q9N2J8 555 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 DLL4Q9NR61 685 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 ZNF275Q9NSD4 429 aaPredicted RBP13.32□□□□□ -0.28
MSH5-201ENST00000375703 WSB2Q9NYS7 404 aaPredicted RBP13.32□□□□□ -0.28
MSH5-201ENST00000375703 AKAP7Q9P0M2 348 aaPredicted RBP13.32□□□□□ -0.28
MSH5-201ENST00000375703 RABL2AQ9UBK7 228 aaPredicted RBP13.32□□□□□ -0.28
MSH5-201ENST00000375703 FAM221BA6H8Z2 402 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 FAM171A2A8MVW0 826 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 NPIPB9F8W1W9 429 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 GMDSO60547 372 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 SERPINI2O75830 405 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 CRYZL1O95825 349 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 HPXP02790 462 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 DNASE1P24855 282 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 GRPRP30550 384 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 CCR9P51686 369 aa13.32□□□□□ -0.28
MSH5-201ENST00000375703 HSF2Q03933 536 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms