RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 APODP05090 189 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 DBIP07108 87 aaKnown RBP12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 PROS1P07225 676 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 SRMP19623 302 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 RUNX2Q13950 521 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 FGL2Q14314 439 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 NHLRC3Q5JS37 347 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 NHLRC1Q6VVB1 395 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 UXS1Q8NBZ7 420 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 ZBTB44Q8NCP5 570 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 SLC25A38Q96DW6 304 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 KLHL15Q96M94 604 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 SARGQ9BW04 601 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 REG4Q9BYZ8 158 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 MCCC2Q9HCC0 563 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 NRIP3Q9NQ35 241 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 NANSQ9NR45 359 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 KCNMB2Q9Y691 235 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 PLSCR5A0PG75 271 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 GXYLT2A0PJZ3 443 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 ANKRD61A6NGH8 418 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 ADAM11O75078 769 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 LDB3O75112 727 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 AGR2O95994 175 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 HIST1H1CP16403 213 aaKnown RBP12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 ACTC1P68032 377 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 ACTA1P68133 377 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 FHL1Q13642 323 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 TUSC1Q2TAM9 212 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 OR5M10Q6IEU7 315 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 TMEM81Q6P7N7 255 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 C3P1Q6ZMU1 363 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 KCTD20Q7Z5Y7 419 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 CNOT9Q92600 299 aaKnown RBP12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 GPR174Q9BXC1 333 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 HDAC8Q9BY41 377 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 MS4A7Q9GZW8 240 aaPredicted RBP12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 SLC6A17Q9H1V8 727 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 UBE2ZQ9H832 354 aaPredicted RBP12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 SDHAF2Q9NX18 166 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 HAO2Q9NYQ3 351 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 FLRT3Q9NZU0 649 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 NTMQ9P121 344 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 COPS3Q9UNS2 423 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 PCDHGA5Q9Y5G8 931 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 TICRRQ7Z2Z1 1910 aa12.96□□□□□ -0.33
CLCNKA-202ENST00000375692 hCG_1807616A0A1W2PRN6 198 aa12.96□□□□□ -0.33
CLCNKA-202ENST00000375692 LRRC72A6NJI9 287 aa12.96□□□□□ -0.33
CLCNKA-202ENST00000375692 C1QTNF3-AMACRE9PGA6 284 aa12.96□□□□□ -0.33
CLCNKA-202ENST00000375692 MBTPS2O43462 519 aa12.96□□□□□ -0.33
CLCNKA-202ENST00000375692 CMPK1P30085 196 aa12.96□□□□□ -0.33
CLCNKA-202ENST00000375692 CTHP32929 405 aa12.96□□□□□ -0.33
CLCNKA-202ENST00000375692 KIR2DL1P43626 348 aaPredicted RBP12.96□□□□□ -0.33
CLCNKA-202ENST00000375692 KIAA1024LP59773 190 aa12.96□□□□□ -0.33
CLCNKA-202ENST00000375692 TNFRSF17Q02223 184 aa12.96□□□□□ -0.33
CLCNKA-202ENST00000375692 EXOSC7Q15024 291 aaKnown RBP12.96□□□□□ -0.33
CLCNKA-202ENST00000375692 LINC00303Q3SY05 128 aa12.96□□□□□ -0.33
CLCNKA-202ENST00000375692 METTL11BQ5VVY1 283 aa12.96□□□□□ -0.33
CLCNKA-202ENST00000375692 ZNF425Q6IV72 752 aa12.96□□□□□ -0.33
CLCNKA-202ENST00000375692 RPL13AP3Q6NVV1 102 aa12.96□□□□□ -0.33
CLCNKA-202ENST00000375692 OVCH1Q7RTY7 1134 aa12.96□□□□□ -0.33
CLCNKA-202ENST00000375692 COX18Q8N8Q8 333 aa12.96□□□□□ -0.33
CLCNKA-202ENST00000375692 OR52B4Q8NGK2 314 aa12.96□□□□□ -0.33
CLCNKA-202ENST00000375692 TRBV23OR9-2A0A075B6M9 112 aa12.96□□□□□ -0.34
CLCNKA-202ENST00000375692 L7N2F9 121 aa12.96□□□□□ -0.34
CLCNKA-202ENST00000375692 LGALS8O00214 317 aa12.96□□□□□ -0.34
CLCNKA-202ENST00000375692 EGFP01133 1207 aa12.96□□□□□ -0.34
CLCNKA-202ENST00000375692 GRPRP30550 384 aa12.96□□□□□ -0.34
CLCNKA-202ENST00000375692 DCTDP32321 178 aa12.96□□□□□ -0.34
CLCNKA-202ENST00000375692 PSMA6P60900 246 aaKnown RBP12.96□□□□□ -0.34
CLCNKA-202ENST00000375692 OC90Q02509 493 aaPredicted RBP12.96□□□□□ -0.34
CLCNKA-202ENST00000375692 GXYLT1Q4G148 440 aa12.96□□□□□ -0.34
CLCNKA-202ENST00000375692 FAM69AQ5T7M9 428 aa12.96□□□□□ -0.34
CLCNKA-202ENST00000375692 COQ8AQ8NI60 647 aa12.96□□□□□ -0.34
CLCNKA-202ENST00000375692 CDX2Q99626 313 aaPredicted RBP12.96□□□□□ -0.34
CLCNKA-202ENST00000375692 C2orf42Q9NWW7 574 aa12.96□□□□□ -0.34
CLCNKA-202ENST00000375692 ADAM18Q9Y3Q7 739 aa12.96□□□□□ -0.34
CLCNKA-202ENST00000375692 MUC3AQ02505 3323 aa12.96□□□□□ -0.34
CLCNKA-202ENST00000375692 DENND4AQ7Z401 1863 aa12.96□□□□□ -0.34
CLCNKA-202ENST00000375692 A0A1B0GUH1 482 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 SELENOFO60613 162 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 KRT33AO76009 404 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 CPMP14384 443 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 RPS4Y1P22090 263 aaKnown RBP12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 DPP4P27487 766 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 PTH2RP49190 550 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 ALKAL2Q6UX46 152 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 BAIAP2L2Q6UXY1 529 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 HDDC2Q7Z4H3 204 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 SLC35F2Q8IXU6 374 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 MEIOBQ8N635 442 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 SEMA4CQ9C0C4 833 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 PPA2Q9H2U2 334 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 LIN7BQ9HAP6 207 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 KLHL9Q9P2J3 617 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 IER3IP1Q9Y5U9 82 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 PIAS3Q9Y6X2 628 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 A0A1B0GWA3 101 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 IFITM5A6NNB3 132 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 FAM171A2A8MVW0 826 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms