RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 DCTN4Q9UJW0 460 aa12.5□□□□□ -0.41
NELFE-201ENST00000375425 GDF2Q9UK05 429 aaPredicted RBP12.5□□□□□ -0.41
NELFE-201ENST00000375425 B3GALT5Q9Y2C3 310 aa12.5□□□□□ -0.41
NELFE-201ENST00000375425 AQP7P3A6NL99 342 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 A8MVM7 634 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 M0R1B8 84 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 CLIC1O00299 241 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 NUDT7P0C024 238 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 NCF2P19878 526 aaPredicted RBP12.49□□□□□ -0.41
NELFE-201ENST00000375425 TTKP33981 857 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 TGFBR3Q03167 851 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 ZNF311Q5JNZ3 666 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 AGAP6Q5VW22 663 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 TMEM225Q6GV28 225 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 SLC2A7Q6PXP3 512 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 AAED1Q7RTV5 226 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 SERPINA11Q86U17 422 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 GPAT4Q86UL3 456 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 PRIMA1Q86XR5 153 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 OR9K2Q8NGE7 335 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 MAL2Q969L2 176 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 TMEM45BQ96B21 275 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 HS6ST2Q96MM7 605 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 ZNF385AQ96PM9 386 aaKnown RBP12.49□□□□□ -0.41
NELFE-201ENST00000375425 SF3B5Q9BWJ5 86 aaKnown RBP12.49□□□□□ -0.41
NELFE-201ENST00000375425 SPATA9Q9BWV2 254 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 TAPBPLQ9BX59 468 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 REG4Q9BYZ8 158 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 AMBRA1Q9C0C7 1298 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 ARMC7Q9H6L4 198 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 CACYBPQ9HB71 228 aaKnown RBP12.49□□□□□ -0.41
NELFE-201ENST00000375425 ADPRHL2Q9NX46 363 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 POU2F3Q9UKI9 436 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 IFT52Q9Y366 437 aa12.49□□□□□ -0.41
NELFE-201ENST00000375425 MPGP29372 298 aa12.48□□□□□ -0.41
NELFE-201ENST00000375425 P2RY4P51582 365 aa12.48□□□□□ -0.41
NELFE-201ENST00000375425 HOXC5Q00444 222 aa12.48□□□□□ -0.41
NELFE-201ENST00000375425 SPOCK1Q08629 439 aa12.48□□□□□ -0.41
NELFE-201ENST00000375425 DEPDC4Q8N2C3 294 aa12.48□□□□□ -0.41
NELFE-201ENST00000375425 C1orf162Q8NEQ5 155 aaPredicted RBP12.48□□□□□ -0.41
NELFE-201ENST00000375425 C3orf49Q96BT1 292 aa12.48□□□□□ -0.41
NELFE-201ENST00000375425 DHRS9Q9BPW9 319 aa12.48□□□□□ -0.41
NELFE-201ENST00000375425 BCL2L10Q9HD36 194 aa12.48□□□□□ -0.41
NELFE-201ENST00000375425 TCF7L2Q9NQB0 619 aa12.48□□□□□ -0.41
NELFE-201ENST00000375425 SLC17A5Q9NRA2 495 aa12.48□□□□□ -0.41
NELFE-201ENST00000375425 POLR3GO15318 223 aaPredicted RBP12.47□□□□□ -0.41
NELFE-201ENST00000375425 FRS3O43559 492 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 SSX4O60224 188 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 NPIPB7O75200 414 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 TGDSO95455 350 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 CDH2P19022 906 aaPredicted RBP12.47□□□□□ -0.41
NELFE-201ENST00000375425 STX1BP61266 288 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 KRTAP1-1Q07627 177 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 FADDQ13158 208 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 AGBL2Q5U5Z8 902 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 C1orf140Q5VVS0 124 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 PRAMEF8Q5VWM4 474 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 PRAMEF7Q5VXH5 474 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 DNM1P46Q6ZS02 220 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 CREB3L2Q70SY1 520 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 ALPK2Q86TB3 2170 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 FUNDC1Q8IVP5 155 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 MUC15Q8N387 334 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 C17orf78Q8N4C9 275 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 POMGNT2Q8NAT1 580 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 C7orf26Q96N11 449 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 EBF4Q9BQW3 602 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 CACNG6Q9BXT2 260 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 RAD21L1Q9H4I0 556 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 PIF1Q9H611 641 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 BARX1Q9HBU1 254 aaPredicted RBP12.47□□□□□ -0.41
NELFE-201ENST00000375425 A4GALTQ9NPC4 353 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 SLCO1B3Q9NPD5 702 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 SLAMF8Q9P0V8 285 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 AMDHD2Q9Y303 409 aa12.47□□□□□ -0.41
NELFE-201ENST00000375425 A0A096LPI6 279 aa12.46□□□□□ -0.41
NELFE-201ENST00000375425 C5orf58C9J3I9 102 aa12.46□□□□□ -0.41
NELFE-201ENST00000375425 VAMP5O95183 116 aa12.46□□□□□ -0.41
NELFE-201ENST00000375425 BMP2P12643 396 aa12.46□□□□□ -0.41
NELFE-201ENST00000375425 HOXB9P17482 250 aaPredicted RBP12.46□□□□□ -0.41
NELFE-201ENST00000375425 MRPL19P49406 292 aaKnown RBP12.46□□□□□ -0.41
NELFE-201ENST00000375425 IDH3AP50213 366 aa12.46□□□□□ -0.41
NELFE-201ENST00000375425 FABP6P51161 128 aa12.46□□□□□ -0.41
NELFE-201ENST00000375425 PRPS1P60891 318 aa12.46□□□□□ -0.41
NELFE-201ENST00000375425 IRX1P78414 480 aaPredicted RBP12.46□□□□□ -0.41
NELFE-201ENST00000375425 SLC25A3Q00325 362 aa12.46□□□□□ -0.41
NELFE-201ENST00000375425 NRF1Q16656 503 aa12.46□□□□□ -0.41
NELFE-201ENST00000375425 C11orf71Q6IPW1 123 aa12.46□□□□□ -0.41
NELFE-201ENST00000375425 BLOC1S3Q6QNY0 202 aa12.46□□□□□ -0.41
NELFE-201ENST00000375425 B3GLCTQ6Y288 498 aa12.46□□□□□ -0.41
NELFE-201ENST00000375425 FBXL14Q8N1E6 418 aa12.46□□□□□ -0.41
NELFE-201ENST00000375425 GOLGA6L1Q8N7Z2 621 aa12.46□□□□□ -0.41
NELFE-201ENST00000375425 STK35Q8TDR2 534 aa12.46□□□□□ -0.41
NELFE-201ENST00000375425 ADAD1Q96M93 576 aaKnown RBP12.46□□□□□ -0.41
NELFE-201ENST00000375425 RSPO3Q9BXY4 272 aaPredicted RBP12.46□□□□□ -0.41
NELFE-201ENST00000375425 CBLN4Q9NTU7 201 aa12.46□□□□□ -0.41
NELFE-201ENST00000375425 SLC25A37Q9NYZ2 338 aa12.46□□□□□ -0.41
NELFE-201ENST00000375425 CCDC167Q9P0B6 97 aa12.46□□□□□ -0.41
NELFE-201ENST00000375425 ATP23Q9Y6H3 246 aa12.46□□□□□ -0.41
NELFE-201ENST00000375425 KIAA1324LA8MWY0 1029 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms