RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 HABP2Q14520 560 aaPredicted RBP11.21□□□□□ -0.61
C9orf3-203ENST00000375315 PEA15Q15121 130 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 ZNF385BQ569K4 471 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 OR2B11Q5JQS5 317 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 FAM27D1Q5T7N8 215 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 EEF1A1P5Q5VTE0 462 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 PTCRAQ6ISU1 281 aaPredicted RBP11.21□□□□□ -0.61
C9orf3-203ENST00000375315 IQCHQ86VS3 1027 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 BOLLQ8N9W6 283 aaKnown RBP11.21□□□□□ -0.61
C9orf3-203ENST00000375315 OR5M1Q8NGP8 315 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 OR5AR1Q8NGP9 310 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 ASB11Q8WXH4 323 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 GTF3AQ92664 365 aaKnown RBP11.21□□□□□ -0.61
C9orf3-203ENST00000375315 TSACCQ96A04 125 aaPredicted RBP11.21□□□□□ -0.61
C9orf3-203ENST00000375315 ART5Q96L15 291 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 MRGPRX1Q96LB2 322 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 FNDC11Q9BVV2 318 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 SLC17A9Q9BYT1 436 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 PLEKHA1Q9HB21 404 aa11.21□□□□□ -0.61
C9orf3-203ENST00000375315 STOX2Q9P2F5 926 aaPredicted RBP11.21□□□□□ -0.61
C9orf3-203ENST00000375315 TDRD6O60522 2096 aaKnown RBP11.21□□□□□ -0.61
C9orf3-203ENST00000375315 A0A0D9SG52 128 aa11.21□□□□□ -0.62
C9orf3-203ENST00000375315 TSPAN11A1L157 253 aa11.21□□□□□ -0.62
C9orf3-203ENST00000375315 PHYHO14832 338 aa11.21□□□□□ -0.62
C9orf3-203ENST00000375315 ACHEP22303 614 aa11.21□□□□□ -0.62
C9orf3-203ENST00000375315 NOS3P29474 1203 aa11.21□□□□□ -0.62
C9orf3-203ENST00000375315 GCGRP47871 477 aa11.21□□□□□ -0.62
C9orf3-203ENST00000375315 CDK3Q00526 305 aa11.21□□□□□ -0.62
C9orf3-203ENST00000375315 KLHL26Q53HC5 615 aa11.21□□□□□ -0.62
C9orf3-203ENST00000375315 LIPJQ5W064 366 aa11.21□□□□□ -0.62
C9orf3-203ENST00000375315 GPR32P1Q8NGA4 272 aa11.21□□□□□ -0.62
C9orf3-203ENST00000375315 ZC3H10Q96K80 434 aaKnown RBP11.21□□□□□ -0.62
C9orf3-203ENST00000375315 REEP4Q9H6H4 257 aa11.21□□□□□ -0.62
C9orf3-203ENST00000375315 TRIM36Q9NQ86 728 aa11.21□□□□□ -0.62
C9orf3-203ENST00000375315 H2AFY2Q9P0M6 372 aaPredicted RBP11.21□□□□□ -0.62
C9orf3-203ENST00000375315 EXOGQ9Y2C4 368 aaKnown RBP11.21□□□□□ -0.62
C9orf3-203ENST00000375315 IGLV3-16A0A075B6K0 115 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 A0A1B0GTQ1 180 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 KANTRA0A1W2PQU2 76 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 A0A1W2PRQ8 180 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 CACNB4O00305 520 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-203ENST00000375315 SAP18O00422 153 aaKnown RBP11.2□□□□□ -0.62
C9orf3-203ENST00000375315 IMPA2O14732 288 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 HYAL3O43820 417 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-203ENST00000375315 PRAMEF4O60810 478 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 UBXN7O94888 489 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 HSD3B2P26439 372 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 GPX4P36969 197 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-203ENST00000375315 P2RY4P51582 365 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 SLC3A1Q07837 685 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 MAPK14Q16539 360 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 CDNFQ49AH0 187 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 RPS26P11Q5JNZ5 115 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-203ENST00000375315 ENTPD8Q5MY95 495 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 PRAMEF9Q5VWM5 478 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 C3orf33Q6P1S2 294 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 ARL9Q6T311 187 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 ESPNLQ6ZVH7 1005 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 IZUMO1Q8IYV9 350 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 ZFPM2Q8WW38 1151 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 FCRL4Q96PJ5 515 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 WDR77Q9BQA1 342 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-203ENST00000375315 PCDHB10Q9UN67 800 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 NUP210Q8TEM1 1887 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-203ENST00000375315 LRIT2A6NDA9 550 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 E7EQ34 232 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 GOSR2O14653 212 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 KRT33AO76009 404 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 GBAP04062 536 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 KLK3P07288 261 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-203ENST00000375315 TYRP1P17643 537 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 CD53P19397 219 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 AK4P27144 223 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-203ENST00000375315 AGTR1P30556 359 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 CSF2RBP32927 897 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 SLC6A12P48065 614 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 HCCSP53701 268 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 ADPRHP54922 357 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 H2BFSP57053 126 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 RAE1P78406 368 aaKnown RBP11.2□□□□□ -0.62
C9orf3-203ENST00000375315 ACER2Q5QJU3 275 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 HEPHL1Q6MZM0 1159 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 C11orf88Q6PI97 169 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 ENPP7Q6UWV6 458 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 AMZ2Q86W34 360 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 DEFB123Q8N688 67 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 EID2Q8N6I1 236 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 ZNF671Q8TAW3 534 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 TCTEX1D2Q8WW35 142 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 HLA-CQ95604 372 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 ZNF354BQ96LW1 612 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 UTP23Q9BRU9 249 aaKnown RBP11.2□□□□□ -0.62
C9orf3-203ENST00000375315 ZNF649Q9BS31 505 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 PLA2G12AQ9BZM1 189 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 EGLN3Q9H6Z9 239 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 TCF7L1Q9HCS4 588 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 KLHL9Q9P2J3 617 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 ACAD8Q9UKU7 415 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 RHPN2P1A8MT19 583 aa11.2□□□□□ -0.62
C9orf3-203ENST00000375315 GPR37L1O60883 481 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms