RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 SYNPRQ8TBG9 265 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 S100A16Q96FQ6 103 aaKnown RBP19.44■□□□□ 0.7
UPF3A-202ENST00000375299 HDAC8Q9BY41 377 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 TMEM27Q9HBJ8 222 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 MBNL1Q9NR56 388 aaKnown RBP19.44■□□□□ 0.7
UPF3A-202ENST00000375299 C14orf105Q9NVL8 296 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 SERTAD3Q9UJW9 196 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 ACOD1A6NK06 481 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 NDUFB6O95139 128 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 PCDH8O95206 1070 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 HIST1H2ABP04908 130 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 CALCRP30988 508 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 DCTDP32321 178 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 HTRA4P83105 476 aaPredicted RBP19.43■□□□□ 0.7
UPF3A-202ENST00000375299 ILF3Q12906 894 aaKnown RBP eCLIP19.43■□□□□ 0.7
UPF3A-202ENST00000375299 RPE65Q16518 533 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 TRMT12Q53H54 448 aaKnown RBP19.43■□□□□ 0.7
UPF3A-202ENST00000375299 HIST3H2AQ7L7L0 130 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 ETFBKMTQ8IXQ9 262 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 ZNF433Q8N7K0 673 aaPredicted RBP19.43■□□□□ 0.7
UPF3A-202ENST00000375299 OR52H1Q8NGJ2 320 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 OR4K13Q8NH42 304 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 HIST1H2ACQ93077 130 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 PMEPA1Q969W9 287 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 SGTBQ96EQ0 304 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 MS4A7Q9GZW8 240 aaPredicted RBP19.43■□□□□ 0.7
UPF3A-202ENST00000375299 ADAP2Q9NPF8 381 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 POM121CA8CG34 1229 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 GPR89AB7ZAQ6 455 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 GPR89BP0CG08 455 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 CLDN12P56749 244 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 FHL1Q13642 323 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 CFAP77Q6ZQR2 320 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 TMUB2Q71RG4 321 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 SLC43A2Q8N370 569 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 COX18Q8N8Q8 333 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 C1orf216Q8TAB5 229 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 ZNF559Q9BR84 538 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 CRISPLD2Q9H0B8 497 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 TTYH1Q9H313 450 aaPredicted RBP19.43■□□□□ 0.7
UPF3A-202ENST00000375299 NCDNQ9UBB6 729 aa19.43■□□□□ 0.7
UPF3A-202ENST00000375299 A0A0B4J2E0 115 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 A0A1B0GX12 115 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 HMSDA8MTL9 139 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 TMEM127O75204 238 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 FGF2P09038 288 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 RAB40ALP0C0E4 278 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 PPP3CBP16298 524 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 HIST1H1CP16403 213 aaKnown RBP19.42■□□□□ 0.7
UPF3A-202ENST00000375299 EPCAMP16422 314 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 SNRPNP63162 240 aaKnown RBP19.42■□□□□ 0.7
UPF3A-202ENST00000375299 PLAURQ03405 335 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 PWWP2BQ6NUJ5 590 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 VN1R4Q7Z5H5 301 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 NAXDQ8IW45 347 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 DOK4Q8TEW6 326 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 RAB40AQ8WXH6 277 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 LRFN5Q96NI6 719 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 LDAHQ9H6V9 325 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 CHRNA9Q9UGM1 479 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 COPS3Q9UNS2 423 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 C19orf53Q9UNZ5 99 aaPredicted RBP19.42■□□□□ 0.7
UPF3A-202ENST00000375299 PLEKHM1Q9Y4G2 1056 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 V9GY05 133 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 ACOT7O00154 380 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 ARPC5O15511 151 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 PTHLHP12272 177 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 ICAM2P13598 275 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 STX4Q12846 297 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 EXOSC6Q5RKV6 272 aaKnown RBP19.42■□□□□ 0.7
UPF3A-202ENST00000375299 SFTPA1Q8IWL2 248 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 OR14A16Q8NHC5 309 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 SP7Q8TDD2 431 aaPredicted RBP19.42■□□□□ 0.7
UPF3A-202ENST00000375299 PNPLA2Q96AD5 504 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 OR5V1Q9UGF6 321 aa19.42■□□□□ 0.7
UPF3A-202ENST00000375299 DOCK9Q9BZ29 2069 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 LGALS8O00214 317 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 GABRA1P14867 456 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 VEGFBP49765 207 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 IL10RAQ13651 578 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 FHL5Q5TD97 284 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 STPG1Q5TH74 334 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 RTL10Q7L3V2 364 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 BVESQ8NE79 360 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 OR52B4Q8NGK2 314 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 HAVCR1Q96D42 359 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 TIMM29Q9BSF4 260 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 PROS1P07225 676 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 CPMP14384 443 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 DLX5P56178 289 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 FIGNL1Q6PIW4 674 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 ZC3H14Q6PJT7 736 aaKnown RBP19.41■□□□□ 0.7
UPF3A-202ENST00000375299 HSD17B13Q7Z5P4 300 aaPredicted RBP19.41■□□□□ 0.7
UPF3A-202ENST00000375299 DNAAF1Q8NEP3 725 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 RPS4Y2Q8TD47 263 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 FBXW5Q969U6 566 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 RSPRY1Q96DX4 576 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 MRPL48Q96GC5 212 aaKnown RBP19.41■□□□□ 0.7
UPF3A-202ENST00000375299 MRI1Q9BV20 369 aa19.41■□□□□ 0.7
UPF3A-202ENST00000375299 DUSP22Q9NRW4 184 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms