RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 TAF9BQ9HBM6 251 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 ZNF107Q9UII5 783 aaPredicted RBP9.5□□□□□ -0.89
PTCH1-204ENST00000375290 BHLHE40O14503 412 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 GPR18Q14330 331 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 FCN2Q15485 313 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 TAF9Q16594 264 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 DPY19L4Q7Z388 723 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 CMTM8Q8IZV2 173 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 KATNB1Q9BVA0 655 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 SPACA1Q9HBV2 294 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 SNX11Q9Y5W9 270 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 SIPA1L3O60292 1781 aaPredicted RBP9.5□□□□□ -0.89
PTCH1-204ENST00000375290 A0A087WZY1 265 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 CCL16O15467 120 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 PPP1R3DO95685 299 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 ABHD16AO95870 558 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 ATXN1LP0C7T5 689 aaKnown RBP9.5□□□□□ -0.89
PTCH1-204ENST00000375290 SH2D5Q6ZV89 423 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 GRAMD2AQ8IUY3 354 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 OR10Z1Q8NGY1 313 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 ZFPM2Q8WW38 1151 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 RSPRY1Q96DX4 576 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 PRSS16Q9NQE7 514 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 SYNGR4O95473 234 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 DUSP3P51452 185 aaPredicted RBP9.5□□□□□ -0.89
PTCH1-204ENST00000375290 CAV3P56539 151 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 FCRLAQ7L513 359 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 SIAH3Q8IW03 269 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 RIMKLAQ8IXN7 391 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 IGSF8Q969P0 613 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 IGSF21Q96ID5 467 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 BCL2L10Q9HD36 194 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 CD300LBA8K4G0 201 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 ZNF705FA8MVS1 300 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-204ENST00000375290 ZNF705DP0CH99 300 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-204ENST00000375290 ZNF705BP0CI00 300 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-204ENST00000375290 DLEU7Q6UYE1 221 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 OR1E3Q8WZA6 343 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 TECTBQ96PL2 329 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 DPH1Q9BZG8 443 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 FGF20Q9NP95 211 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-204ENST00000375290 MAN2C1Q9NTJ4 1040 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 SPHK1Q9NYA1 384 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 SUSD2Q9UGT4 822 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 FURINP09958 794 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 ADRA2CP18825 462 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 FUT1P19526 365 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 DLX2Q07687 328 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-204ENST00000375290 FOXB2Q5VYV0 432 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 SUSD1Q6UWL2 747 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 ACOT4Q8N9L9 421 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 PDXPQ96GD0 296 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 ZC3HAV1LQ96H79 300 aaKnown RBP9.49□□□□□ -0.89
PTCH1-204ENST00000375290 NAA50Q9GZZ1 169 aaKnown RBP9.49□□□□□ -0.89
PTCH1-204ENST00000375290 UBQLN3Q9H347 655 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 TAS2R5Q9NYW4 299 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 SFTPDP35247 375 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 HTR6P50406 440 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 HTR3DQ70Z44 454 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 OR52I1Q8NGK6 324 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 CLSTN3Q9BQT9 956 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 IL21RQ9HBE5 538 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 MYOTQ9UBF9 498 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 SLC9B1P1A6NJY1 282 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 ZNF195O14628 629 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 CLDN6P56747 220 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 PDZK1IP1Q13113 114 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 ALKAL2Q6UX46 152 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 OR6K3Q8NGY3 331 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 ARHGAP9Q9BRR9 750 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 SIDT1Q9NXL6 827 aaKnown RBP9.49□□□□□ -0.89
PTCH1-204ENST00000375290 CNIH4Q9P003 139 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 KIR2DS1A0A191URI9 304 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 DTYMKP23919 212 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 KIR2DS4P43632 304 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 EIF2B1Q14232 305 aaKnown RBP9.49□□□□□ -0.89
PTCH1-204ENST00000375290 KIR2DS1Q14954 304 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 GLYR1Q49A26 553 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-204ENST00000375290 DEFB134Q4QY38 66 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 FBXW12Q6X9E4 464 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 SLC25A44Q96H78 314 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-204ENST00000375290 SERTM1A2A2V5 107 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 CPMP14384 443 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 RABIFP47224 123 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 EMP2P54851 167 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 SHC2P98077 582 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 GALNT16Q8N428 558 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 TMEM106AQ96A25 262 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 SMIM19Q96E16 107 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 HCAR1Q9BXC0 346 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 HRASLS2Q9NWW9 162 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 V9GYS6 101 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 SLX4Q8IY92 1834 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 IGLV3-10A0A075B6K4 115 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 CDC123O75794 336 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-204ENST00000375290 IGHG1P01857 330 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 LMAN2Q12907 356 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 FAHD2BQ6P2I3 314 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-204ENST00000375290 TMPPEQ6ZT21 453 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 OTOP2Q7RTS6 562 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms