RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 CHRNA10Q9GZZ6 450 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 KLHL21Q9UJP4 597 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 MEMO1Q9Y316 297 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 KCNE1BA0A087WTH5 132 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 GAGE10A6NGK3 116 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 CYB5BO43169 146 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 RAD51DO75771 328 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 CYP2J2P51589 502 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 ARPP19P56211 112 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 TLE1Q04724 770 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 ACSM2AQ08AH3 577 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 LAMTOR4Q0VGL1 99 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 GK3PQ14409 553 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 TTLL4Q14679 1199 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 C9orf64Q5T6V5 341 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 RSBN1Q5VWQ0 802 aaPredicted RBP8.26□□□□□ -1.09
UBR4-201ENST00000375218 ACSM2BQ68CK6 577 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 Q6ZVU0 165 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 ZDHHC23Q8IYP9 409 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 OR52L2PQ8NGH6 319 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 OR52I2Q8NH67 350 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 SOCS4Q8WXH5 440 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 ZNF382Q96SR6 550 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 DCLRE1BQ9H816 532 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 PRSS16Q9NQE7 514 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 SERTAD3Q9UJW9 196 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 SH2B3Q9UQQ2 575 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 UTP11Q9Y3A2 253 aaKnown RBP8.26□□□□□ -1.09
UBR4-201ENST00000375218 MRPS18CQ9Y3D5 142 aaKnown RBP8.26□□□□□ -1.09
UBR4-201ENST00000375218 hCG_38984A0A1B0GV85 526 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 C3orf70A6NLC5 250 aaPredicted RBP8.26□□□□□ -1.09
UBR4-201ENST00000375218 M0R036 132 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 GYG2O15488 501 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 GRPRP30550 384 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 SDHAP31040 664 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 CD68P34810 354 aaPredicted RBP8.26□□□□□ -1.09
UBR4-201ENST00000375218 MVKQ03426 396 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 DET1Q7L5Y6 550 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 RANBP3LQ86VV4 465 aaPredicted RBP8.26□□□□□ -1.09
UBR4-201ENST00000375218 OR2AK2Q8NG84 335 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 LINC01599Q8WXQ3 324 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 CXorf40BQ96DE9 158 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 PGAM5Q96HS1 289 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 FN3KQ9H479 309 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 UBE2ZQ9H832 354 aaPredicted RBP8.26□□□□□ -1.09
UBR4-201ENST00000375218 TMLHEQ9NVH6 421 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 BABAM2Q9NXR7 383 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 SS18L2Q9UHA2 77 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 ZNF230Q9UIE0 474 aaPredicted RBP8.26□□□□□ -1.09
UBR4-201ENST00000375218 CDH22Q9UJ99 828 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 ACSL6Q9UKU0 697 aa8.26□□□□□ -1.09
UBR4-201ENST00000375218 CCL15-CCL14A0A0B4J2E2 113 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 RAB29O14966 203 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 AP2A2O94973 939 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 VTNP04004 478 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 SERPINE2P07093 398 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 HOXD4P09016 255 aaPredicted RBP8.25□□□□□ -1.09
UBR4-201ENST00000375218 SLC35E2P0CK97 266 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 NOVA1P51513 510 aaKnown RBP8.25□□□□□ -1.09
UBR4-201ENST00000375218 ART1P52961 327 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 CLDN12P56749 244 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 EEFSECP57772 596 aaKnown RBP8.25□□□□□ -1.09
UBR4-201ENST00000375218 OR4D2P58180 307 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 BAMBIQ13145 260 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 RBBP7Q16576 425 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 CCL15Q16663 113 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 ACSM3Q53FZ2 586 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 BHLHA9Q7RTU4 235 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 ASCL5Q7RTU5 278 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 ZNF683Q8IZ20 524 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 ARRDC1Q8N5I2 433 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 CDRT4Q8N9R6 151 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 CXorf58Q96LI9 332 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 SLA2Q9H6Q3 261 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 GBA2Q9HCG7 927 aaPredicted RBP8.25□□□□□ -1.09
UBR4-201ENST00000375218 NLKQ9UBE8 527 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 LOC102723971A0A1B0GUV8 181 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 ALDOBP05062 364 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 SPA17Q15506 151 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 BSXQ3C1V8 233 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 IDNKQ5T6J7 187 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 DOK6Q6PKX4 331 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 B3GNT7Q8NFL0 401 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 OR6N1Q8NGY5 312 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 NXPE2Q96DL1 559 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 NSUN3Q9H649 340 aaKnown RBP8.25□□□□□ -1.09
UBR4-201ENST00000375218 PAK6Q9NQU5 681 aaPredicted RBP8.25□□□□□ -1.09
UBR4-201ENST00000375218 HES2Q9Y543 173 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 TBC1D3FA6NER0 549 aaPredicted RBP8.25□□□□□ -1.09
UBR4-201ENST00000375218 H3BNH8 94 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 CYP26A1O43174 497 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 CYBAP13498 195 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 NPBWR2P48146 333 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 LSM11P83369 360 aaKnown RBP eCLIP8.25□□□□□ -1.09
UBR4-201ENST00000375218 SRSF6Q13247 344 aaKnown RBP8.25□□□□□ -1.09
UBR4-201ENST00000375218 PIGGQ5H8A4 983 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 ZNF770Q6IQ21 691 aaPredicted RBP8.25□□□□□ -1.09
UBR4-201ENST00000375218 PAQR9Q6ZVX9 377 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 MFSD9Q8NBP5 474 aa8.25□□□□□ -1.09
UBR4-201ENST00000375218 PRR11Q96HE9 360 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms