RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ICAM5Q9UMF0 924 aa11.06□□□□□ -0.64
HMGCL-202ENST00000374487 ZNF337Q9Y3M9 751 aa11.06□□□□□ -0.64
HMGCL-202ENST00000374487 MMACHCQ9Y4U1 282 aa11.06□□□□□ -0.64
HMGCL-202ENST00000374487 CACNA1AO00555 2505 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 AKAP13Q12802 2813 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 IGHV1OR21-1A0A087WYE8 117 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 CPED1A4D0V7 1026 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 MCIDASD6RGH6 385 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 SSX4O60224 188 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 HPGDSO60760 199 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 ADRB1P08588 477 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 UBL4AP11441 157 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 CFL1P23528 166 aaKnown RBP11.05□□□□□ -0.64
HMGCL-202ENST00000374487 TPTEP56180 551 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 LGALS3BPQ08380 585 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 CBX3Q13185 183 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 MADCAM1Q13477 382 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 PON3Q15166 354 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 TAB1Q15750 504 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 WBP2NLQ6ICG8 309 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 DPY19L2P2Q6ZN68 376 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 SLITRK4Q8IW52 837 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 NLGN4YQ8NFZ3 816 aaPredicted RBP11.05□□□□□ -0.64
HMGCL-202ENST00000374487 C3orf49Q96BT1 292 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 ZMYND19Q96E35 227 aaPredicted RBP11.05□□□□□ -0.64
HMGCL-202ENST00000374487 MVB12AQ96EY5 273 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 TXNDC15Q96J42 360 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 LRFN5Q96NI6 719 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 GAL3ST4Q96RP7 486 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 ATF6BQ99941 703 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 NXF5Q9H1B4 397 aaKnown RBP11.05□□□□□ -0.64
HMGCL-202ENST00000374487 WASF3Q9UPY6 502 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 ADAM18Q9Y3Q7 739 aa11.05□□□□□ -0.64
HMGCL-202ENST00000374487 SHISA3A0PJX4 238 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 A8MU76 341 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 E9PI62 339 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 AGRPO00253 132 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 YKT6O15498 198 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 PLPP2O43688 288 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 NUDT21O43809 227 aaKnown RBP11.04□□□□□ -0.64
HMGCL-202ENST00000374487 DUX1O43812 170 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 IL33O95760 270 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 PNMTP11086 282 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 PYCR1P32322 319 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 CAPZA2P47755 286 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 MTNR1BP49286 362 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 OR12D2P58182 307 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 TRAM1Q15629 374 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 PRAMEF17Q5VTA0 474 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 FAAH2Q6GMR7 532 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 SPATC1Q76KD6 591 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 VASH1Q7L8A9 365 aaPredicted RBP11.04□□□□□ -0.64
HMGCL-202ENST00000374487 CELF2-AS1Q8N7Q2 184 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 FAM181AQ8N9Y4 354 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 OR51L1Q8NGJ5 315 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 TSLPQ969D9 159 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 KIAA1143Q96AT1 154 aaPredicted RBP11.04□□□□□ -0.64
HMGCL-202ENST00000374487 LCORQ96JN0 433 aaPredicted RBP11.04□□□□□ -0.64
HMGCL-202ENST00000374487 SLC19A3Q9BZV2 496 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 CELSR3Q9NYQ7 3312 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 BLOC1S5-TXNDC5H3BN57 136 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 ZNF264O43296 627 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 OR7A10O76100 309 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 UTS2O95399 124 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 CD53P19397 219 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 ACVR1BP36896 505 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 ADH7P40394 386 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 TMED10P49755 219 aaKnown RBP11.04□□□□□ -0.64
HMGCL-202ENST00000374487 PRPS1P60891 318 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 E2F1Q01094 437 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 ZNF85Q03923 595 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 NSDHLQ15738 373 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 CD226Q15762 336 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 GXYLT1Q4G148 440 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 LCN1P1Q5VSP4 162 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 CNIH2Q6PI25 160 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 GLRX5Q86SX6 157 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 CARFQ8N187 725 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 GHDCQ8N2G8 530 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 ADOQ96SZ5 270 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 CNN2Q99439 309 aaKnown RBP11.04□□□□□ -0.64
HMGCL-202ENST00000374487 SCNM1Q9BWG6 230 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 ZNF304Q9HCX3 659 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 KLHL1Q9NR64 748 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 ADAM30Q9UKF2 790 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 FREM2Q5SZK8 3169 aa11.04□□□□□ -0.64
HMGCL-202ENST00000374487 DVL2O14641 736 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 SERPINI2O75830 405 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 CSF3P09919 207 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 OR2T7P0C7T2 308 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 GLB1P16278 677 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 FBLP22087 321 aaKnown RBP11.03□□□□□ -0.64
HMGCL-202ENST00000374487 HCCSP53701 268 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 OR2B6P58173 313 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 IL18Q14116 193 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 ELAVL1Q15717 326 aaKnown RBP11.03□□□□□ -0.64
HMGCL-202ENST00000374487 IDNKQ5T6J7 187 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 HLA-DQA1Q5Y7H0 255 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 CBLN3Q6UW01 205 aa11.03□□□□□ -0.64
HMGCL-202ENST00000374487 RPTNQ6XPR3 784 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms