RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 OGFOD3Q6PK18 319 aa26.45■■□□□ 1.82
SSBP3-204ENST00000371320 PRR23CQ6ZRP0 262 aa26.45■■□□□ 1.82
SSBP3-204ENST00000371320 ATG4DQ86TL0 474 aaPredicted RBP26.45■■□□□ 1.82
SSBP3-204ENST00000371320 DUSP18Q8NEJ0 188 aa26.45■■□□□ 1.82
SSBP3-204ENST00000371320 OR6K6Q8NGW6 343 aa26.45■■□□□ 1.82
SSBP3-204ENST00000371320 ZPLD1Q8TCW7 415 aa26.45■■□□□ 1.82
SSBP3-204ENST00000371320 OIT3Q8WWZ8 545 aa26.45■■□□□ 1.82
SSBP3-204ENST00000371320 RNF31Q96EP0 1072 aa26.45■■□□□ 1.82
SSBP3-204ENST00000371320 HSPA12BQ96MM6 686 aa26.45■■□□□ 1.82
SSBP3-204ENST00000371320 GNG8Q9UK08 70 aa26.45■■□□□ 1.82
SSBP3-204ENST00000371320 BLOC1S5-TXNDC5H3BN57 136 aa26.44■■□□□ 1.82
SSBP3-204ENST00000371320 UTS2O95399 124 aa26.44■■□□□ 1.82
SSBP3-204ENST00000371320 RAB3BP20337 219 aa26.44■■□□□ 1.82
SSBP3-204ENST00000371320 RORAP35398 523 aa26.44■■□□□ 1.82
SSBP3-204ENST00000371320 CBLN3Q6UW01 205 aa26.44■■□□□ 1.82
SSBP3-204ENST00000371320 Q8N9G6 341 aaPredicted RBP26.44■■□□□ 1.82
SSBP3-204ENST00000371320 CADM4Q8NFZ8 388 aa26.44■■□□□ 1.82
SSBP3-204ENST00000371320 SLC7A6Q92536 515 aa26.44■■□□□ 1.82
SSBP3-204ENST00000371320 GPX7Q96SL4 187 aaPredicted RBP26.44■■□□□ 1.82
SSBP3-204ENST00000371320 NMNAT2Q9BZQ4 307 aa26.44■■□□□ 1.82
SSBP3-204ENST00000371320 HDHD2Q9H0R4 259 aa26.44■■□□□ 1.82
SSBP3-204ENST00000371320 HEATR5AQ86XA9 2040 aa26.44■■□□□ 1.82
SSBP3-204ENST00000371320 SELENOFO60613 162 aa26.43■■□□□ 1.82
SSBP3-204ENST00000371320 SERPINI2O75830 405 aa26.43■■□□□ 1.82
SSBP3-204ENST00000371320 NPR2P20594 1047 aa26.43■■□□□ 1.82
SSBP3-204ENST00000371320 SLC25A35Q3KQZ1 300 aa26.43■■□□□ 1.82
SSBP3-204ENST00000371320 UTS2BQ765I0 119 aa26.43■■□□□ 1.82
SSBP3-204ENST00000371320 GLCCI1Q86VQ1 547 aa26.43■■□□□ 1.82
SSBP3-204ENST00000371320 TRMT10AQ8TBZ6 339 aaKnown RBP26.43■■□□□ 1.82
SSBP3-204ENST00000371320 ZDHHC19Q8WVZ1 309 aaPredicted RBP26.43■■□□□ 1.82
SSBP3-204ENST00000371320 TSLPQ969D9 159 aa26.43■■□□□ 1.82
SSBP3-204ENST00000371320 MRPL48Q96GC5 212 aaKnown RBP26.43■■□□□ 1.82
SSBP3-204ENST00000371320 NCDNQ9UBB6 729 aa26.43■■□□□ 1.82
SSBP3-204ENST00000371320 NUFIP1Q9UHK0 495 aaKnown RBP26.43■■□□□ 1.82
SSBP3-204ENST00000371320 RBMS1P29558 406 aaKnown RBP26.43■■□□□ 1.82
SSBP3-204ENST00000371320 RPL6Q02878 288 aaKnown RBP26.43■■□□□ 1.82
SSBP3-204ENST00000371320 UBXN2BQ14CS0 331 aa26.43■■□□□ 1.82
SSBP3-204ENST00000371320 APOOLQ6UXV4 268 aa26.43■■□□□ 1.82
SSBP3-204ENST00000371320 WACQ9BTA9 647 aa26.43■■□□□ 1.82
SSBP3-204ENST00000371320 OR2B2Q9GZK3 357 aa26.43■■□□□ 1.82
SSBP3-204ENST00000371320 CHRDQ9H2X0 955 aa26.43■■□□□ 1.82
SSBP3-204ENST00000371320 EXOSC3Q9NQT5 275 aaKnown RBP26.43■■□□□ 1.82
SSBP3-204ENST00000371320 UCKL1Q9NWZ5 548 aa26.43■■□□□ 1.82
SSBP3-204ENST00000371320 NLKQ9UBE8 527 aa26.43■■□□□ 1.82
SSBP3-204ENST00000371320 NPFFR2Q9Y5X5 522 aa26.43■■□□□ 1.82
SSBP3-204ENST00000371320 RNF215Q9Y6U7 377 aa26.43■■□□□ 1.82
SSBP3-204ENST00000371320 TRAV1-2A0A0B4J238 106 aa26.42■■□□□ 1.82
SSBP3-204ENST00000371320 ZNF264O43296 627 aa26.42■■□□□ 1.82
SSBP3-204ENST00000371320 PAHP00439 452 aa26.42■■□□□ 1.82
SSBP3-204ENST00000371320 AQP2P41181 271 aa26.42■■□□□ 1.82
SSBP3-204ENST00000371320 EPHA4P54764 986 aa26.42■■□□□ 1.82
SSBP3-204ENST00000371320 ZNF74Q16587 644 aa26.42■■□□□ 1.82
SSBP3-204ENST00000371320 RPL22L1Q6P5R6 122 aaKnown RBP26.42■■□□□ 1.82
SSBP3-204ENST00000371320 DTX3Q8N9I9 347 aa26.42■■□□□ 1.82
SSBP3-204ENST00000371320 DMRTB1Q96MA1 342 aa26.42■■□□□ 1.82
SSBP3-204ENST00000371320 TP63Q9H3D4 680 aaPredicted RBP26.42■■□□□ 1.82
SSBP3-204ENST00000371320 CCDC86Q9H6F5 360 aaKnown RBP26.42■■□□□ 1.82
SSBP3-204ENST00000371320 NANSQ9NR45 359 aa26.42■■□□□ 1.82
SSBP3-204ENST00000371320 COPS3Q9UNS2 423 aa26.42■■□□□ 1.82
SSBP3-204ENST00000371320 TRBV2A0A0J9YWF9 115 aa26.42■■□□□ 1.82
SSBP3-204ENST00000371320 TEX13CA0A0J9YWL9 993 aa26.42■■□□□ 1.82
SSBP3-204ENST00000371320 A0A1W2PPK0 400 aa26.42■■□□□ 1.82
SSBP3-204ENST00000371320 IGF2P01344 180 aa26.42■■□□□ 1.82
SSBP3-204ENST00000371320 FAM157BP0CG42 384 aa26.42■■□□□ 1.82
SSBP3-204ENST00000371320 PITPNBP48739 271 aa26.42■■□□□ 1.82
SSBP3-204ENST00000371320 ARL4DP49703 201 aa26.42■■□□□ 1.82
SSBP3-204ENST00000371320 NXPH1P58417 271 aa26.42■■□□□ 1.82
SSBP3-204ENST00000371320 LEG1Q6P5S2 330 aa26.42■■□□□ 1.82
SSBP3-204ENST00000371320 LCORQ96JN0 433 aaPredicted RBP26.42■■□□□ 1.82
SSBP3-204ENST00000371320 OR1F2PQ96R84 312 aa26.42■■□□□ 1.82
SSBP3-204ENST00000371320 ARL6IP5O75915 188 aa26.41■■□□□ 1.82
SSBP3-204ENST00000371320 EDNRAP25101 427 aa26.41■■□□□ 1.82
SSBP3-204ENST00000371320 IL10RAQ13651 578 aa26.41■■□□□ 1.82
SSBP3-204ENST00000371320 SF3B4Q15427 424 aaKnown RBP eCLIP26.41■■□□□ 1.821e-6■■■■■ 27.4
SSBP3-204ENST00000371320 Q96M85 177 aa26.41■■□□□ 1.82
SSBP3-204ENST00000371320 ACOXLQ9NUZ1 547 aa26.41■■□□□ 1.82
SSBP3-204ENST00000371320 MRTO4Q9UKD2 239 aaKnown RBP26.41■■□□□ 1.82
SSBP3-204ENST00000371320 HIF3AQ9Y2N7 669 aa26.41■■□□□ 1.82
SSBP3-204ENST00000371320 FRG2CA6NGY1 282 aa26.4■■□□□ 1.82
SSBP3-204ENST00000371320 CENPXA8MT69 81 aa26.4■■□□□ 1.82
SSBP3-204ENST00000371320 H3BMH7 237 aa26.4■■□□□ 1.82
SSBP3-204ENST00000371320 HLA-DMAP28067 261 aa26.4■■□□□ 1.82
SSBP3-204ENST00000371320 OR1D5P58170 312 aa26.4■■□□□ 1.82
SSBP3-204ENST00000371320 IFITM2Q01629 132 aa26.4■■□□□ 1.82
SSBP3-204ENST00000371320 TATDN3Q17R31 274 aa26.4■■□□□ 1.82
SSBP3-204ENST00000371320 MOGAT1Q96PD6 335 aa26.4■■□□□ 1.82
SSBP3-204ENST00000371320 ADOQ96SZ5 270 aa26.4■■□□□ 1.82
SSBP3-204ENST00000371320 PCED1AQ9H1Q7 454 aa26.4■■□□□ 1.82
SSBP3-204ENST00000371320 DHCR7Q9UBM7 475 aaKnown RBP26.4■■□□□ 1.82
SSBP3-204ENST00000371320 PRUNE2Q8WUY3 3088 aa26.4■■□□□ 1.82
SSBP3-204ENST00000371320 A0A1B0GVC2 190 aa26.4■■□□□ 1.82
SSBP3-204ENST00000371320 A6NIN4 97 aa26.4■■□□□ 1.82
SSBP3-204ENST00000371320 GLCEO94923 617 aa26.4■■□□□ 1.82
SSBP3-204ENST00000371320 HSD11B2P80365 405 aa26.4■■□□□ 1.82
SSBP3-204ENST00000371320 CCDC58Q4VC31 144 aa26.4■■□□□ 1.82
SSBP3-204ENST00000371320 JAZF1Q86VZ6 243 aa26.4■■□□□ 1.82
SSBP3-204ENST00000371320 SDR16C5Q8N3Y7 309 aa26.4■■□□□ 1.82
SSBP3-204ENST00000371320 LIPHQ8WWY8 451 aa26.4■■□□□ 1.82
SSBP3-204ENST00000371320 SNX18Q96RF0 628 aa26.4■■□□□ 1.82
SSBP3-204ENST00000371320 SMAD5Q99717 465 aaKnown RBP26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms