RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 TFAP2EQ6VUC0 442 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 TMPRSS11FQ6ZWK6 438 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 BCORP1Q8N888 145 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 OR4C3Q8NH37 302 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 PTPMT1Q8WUK0 201 aaPredicted RBP11.75□□□□□ -0.53
GPC3-201ENST00000370818 BPIFA2Q96DR5 249 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 ZNF426Q9BUY5 554 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 RDH8Q9NYR8 311 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 DHCR7Q9UBM7 475 aaKnown RBP11.75□□□□□ -0.53
GPC3-201ENST00000370818 UBQLN2Q9UHD9 624 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 CBLCQ9ULV8 474 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 KCNMB2Q9Y691 235 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 COL6A3P12111 3177 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 ASXL3Q9C0F0 2248 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 BHLHE40O14503 412 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 NGFRP08138 427 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 GALNSP34059 522 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 ATP12AP54707 1039 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 CDH11P55287 796 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 SERTAD2Q14140 314 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 LGALSLQ3ZCW2 172 aaPredicted RBP11.75□□□□□ -0.53
GPC3-201ENST00000370818 THSD4Q6ZMP0 1018 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 PLXDC1Q8IUK5 500 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 ZNF321PQ8N8H1 164 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 OR6M1Q8NGM8 313 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 OR1L3Q8NH93 324 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 FANK1Q8TC84 345 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 UFD1Q92890 307 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 PHF21AQ96BD5 680 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 HS6ST2Q96MM7 605 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 LMF1Q96S06 567 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 KCNJ15Q99712 375 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 G6PC3Q9BUM1 346 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 EVA1AQ9H8M9 152 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 B3GAT2Q9NPZ5 323 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 HINT3Q9NQE9 182 aaKnown RBP11.75□□□□□ -0.53
GPC3-201ENST00000370818 NDUFB11Q9NX14 153 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 SEMA5BQ9P283 1151 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 SSR3Q9UNL2 185 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 SIGLEC7Q9Y286 467 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 MED31Q9Y3C7 131 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 SIT1Q9Y3P8 196 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 HRH3Q9Y5N1 445 aa11.75□□□□□ -0.53
GPC3-201ENST00000370818 A0A0A6YYJ9 748 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 C17orf105B2RV13 164 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 GTPBP1O00178 669 aaKnown RBP11.74□□□□□ -0.53
GPC3-201ENST00000370818 AKAP8O43823 692 aaKnown RBP11.74□□□□□ -0.53
GPC3-201ENST00000370818 CFDP00746 253 aaPredicted RBP11.74□□□□□ -0.53
GPC3-201ENST00000370818 FOLR1P15328 257 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 ZP3P21754 424 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 EFNA3P52797 238 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 CTBP2P56545 445 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 C1DQ13901 141 aaKnown RBP11.74□□□□□ -0.53
GPC3-201ENST00000370818 P2RY14Q15391 338 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 OR2G6Q5TZ20 316 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 LIPKQ5VXJ0 399 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 CARFQ8N187 725 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 D2HGDHQ8N465 521 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 OR4F15Q8NGB8 312 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 OR13C2Q8NGS9 318 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 TM9SF4Q92544 642 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 SENP5Q96HI0 755 aaPredicted RBP11.74□□□□□ -0.53
GPC3-201ENST00000370818 GUCD1Q96NT3 240 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 C1QTNF6Q9BXI9 259 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 TEX12Q9BXU0 123 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 PRDM6Q9NQX0 595 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 ZNF98A6NK75 572 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 FAM183AA6NL82 134 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 DUX1O43812 170 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 HMGN1P05114 100 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 LIMS3P0CW19 117 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 LIMS4P0CW20 117 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 HK1P19367 917 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 WNT4P56705 351 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.74□□□□□ -0.53
GPC3-201ENST00000370818 NDUFAF6Q330K2 333 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 TSSK4Q6SA08 328 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 MED25Q71SY5 747 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 LRRC17Q8N6Y2 441 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 ZNF485Q8NCK3 441 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 TSLPQ969D9 159 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 RFKQ969G6 155 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 TMEM43Q9BTV4 400 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 GSX2Q9BZM3 304 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.74□□□□□ -0.53
GPC3-201ENST00000370818 TXNL4BQ9NX01 149 aaKnown RBP11.74□□□□□ -0.53
GPC3-201ENST00000370818 OR10H1Q9Y4A9 318 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 KLF2Q9Y5W3 355 aaPredicted RBP11.74□□□□□ -0.53
GPC3-201ENST00000370818 IGKV3D-11A0A0A0MRZ8 115 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.74□□□□□ -0.53
GPC3-201ENST00000370818 TMEM129A0AVI4 362 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 IRGMA1A4Y4 181 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 NUPL2O15504 423 aaKnown RBP11.74□□□□□ -0.53
GPC3-201ENST00000370818 B3GALNT1O75752 331 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 ACSM4P0C7M7 580 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 CD79BP40259 229 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 ARL4DP49703 201 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 RAB14P61106 215 aa11.74□□□□□ -0.53
GPC3-201ENST00000370818 SF3A2Q15428 464 aaKnown RBP11.74□□□□□ -0.53
GPC3-201ENST00000370818 ALG10BQ5I7T1 473 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms